contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA400391" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6791873 | 6791873 | PRJNA400391_S_NODE_6_length_1384_cov_5.016308_g3_i0 | PRJNA400391 | 6 | 1384 | 5.016308 | 69.42570272 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 1639 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g3 | i0 | 88.176 | 115.013728323699 | 1387 | 149 | 100 | 15 | 1 | 1381 | 653507 | 654884 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 159179 | 1639 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 7458993 | 7458993 | PRJNA400391_S_NODE_4866_length_180_cov_47.717241_g4805_i0 | PRJNA400391 | 4866 | 180 | 47.717241 | 85.8910338 | Chlamydiia | 204429 | Bacteria | Bacteria | 291 | 2.9699999999999998e-74 | NTclustered | gi|310755813|gb|HQ213703.1| | 174324 | g4805 | i0 | 96.571 | 119.638888888889 | 175 | 6 | 97 | 0 | 1 | 175 | 319 | 493 | Uncultured Chlamydiales bacterium clone 4_M13 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 21535 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 10009073 | 10009073 | PRJNA400391_S_NODE_1248_length_332_cov_26.343434_g1187_i0 | PRJNA400391 | 1248 | 332 | 26.343434 | 87.46020088 | Parachlamydia | 83551 | Bacteria | Bacteria | 425 | 1.5999999999999999e-114 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g1187 | i0 | 89.851 | 208.825301204819 | 335 | 29 | 100 | 5 | 1 | 332 | 1666 | 1998 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 69330 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 12559709 | 12559709 | PRJNA400391_S_NODE_250_length_553_cov_5.378378_g3_i1 | PRJNA400391 | 250 | 553 | 5.378378 | 29.74243034 | Candidatus Syngnamydia | 1803801 | Bacteria | Bacteria | 590 | 9.329999999999999e-164 | NTclustered | gi|124021662|gb|EF177461.1| | 420390 | g3 | i1 | 86.556 | 132.244122965642 | 543 | 63 | 97 | 9 | 15 | 553 | 2942 | 2406 | Chlamydiales symbiont of Xenoturbella westbladi 16S ribosomal RNA gene, partial sequence; 23S ribosomal RNA gene, complete sequence; and putative homing endonuclease gene, complete cds | blastn | 73131 | 590 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Chlamydiales symbiont of Xenoturbella westbladi | ||
| 16383420 | 16383420 | PRJNA400391_S_NODE_2373_length_259_cov_6.316964_g2312_i0 | PRJNA400391 | 2373 | 259 | 6.316964 | 16.36093676 | Waddlia | 71666 | Bacteria | Bacteria | 233 | 7.85e-57 | NTclustered | gi|297375547|gb|CP001928.1| | 716544 | g2312 | i0 | 84.774 | 113.903474903475 | 243 | 25 | 93 | 9 | 2 | 241 | 1333878 | 1334111 | Waddlia chondrophila WSU 86-1044, complete genome | blastn | 29501 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 20815713 | 20815713 | PRJNA400391_S_NODE_317_length_516_cov_4.272349_g263_i0 | PRJNA400391 | 317 | 516 | 4.272349 | 22.04532084 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 593 | 6.699999999999998e-165 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g263 | i0 | 87.356 | 159.744186046512 | 522 | 60 | 100 | 6 | 1 | 516 | 654879 | 655400 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 82428 | 593 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 24640523 | 24640523 | PRJNA400391_S_NODE_940_length_363_cov_353.868902_g879_i0 | PRJNA400391 | 940 | 363 | 353.868902 | 1284.54411426 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 468 | 2.88e-127 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g879 | i0 | 90.305 | 178.570247933884 | 361 | 30 | 99 | 5 | 6 | 363 | 652467 | 652825 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 64821 | 468 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;