RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA399711" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA399711 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18265050 18265050 PRJNA399711_P_NODE_14595_length_176_cov_2.863309_g14529_i0 PRJNA399711 14595 176 2.863309 5.03942384 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 261 2.27e-65   NTclustered gi|56757963|gb|AY815390.1| 6182 g14529 i0 98 106.352272727273 150 3 86 0 21 170 1275 1424 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 18718 261 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25563041 25563041 PRJNA399711_S_NODE_31697_length_234_cov_3.873096_g31555_i0 PRJNA399711 31697 234 3.873096 9.06304464 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 350 6.64e-92   NTclustered gi|60600058|gb|AY810684.1| 6182 g31555 i0 100 4.84188034188034 189 0 81 0 5 193 481 293 Schistosoma japonicum SJCHGC04723 protein mRNA, partial cds blastn 1133 350 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25563503 25563503 PRJNA399711_S_NODE_42713_length_211_cov_1.545977_g42571_i0 PRJNA399711 42713 211 1.545977 3.26201147 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 52.8 0.019   NTclustered gi|1084292427|ref|XM_018794957.1| 6183 g42571 i0 100 0.132701421800948 28 0 13 0 23 50 1030 1057 Schistosoma mansoni putative abc transporter partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
25564793 25564793 PRJNA399711_S_NODE_78153_length_169_cov_4.401515_g78011_i0 PRJNA399711 78153 169 4.401515 7.43856035 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 235 1.31e-57   NTclustered gi|56755494|gb|AY814194.1| 6182 g78011 i0 97.794 60.1065088757396 136 3 80 0 2 137 501 636 Schistosoma japonicum SJCHGC03850 protein mRNA, complete cds blastn 10158 235 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25700210 25700210 PRJNA399711_S_NODE_5722_length_410_cov_110.402145_g5580_i0 PRJNA399711 5722 410 110.402145 452.6487945 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 545 1.48e-150   NTclustered gi|1124902734|gb|AY812498.2| 6182 g5580 i0 92.651 66.1780487804878 381 25 93 3 1 380 99 477 Schistosoma japonicum SJCHGC01615 protein mRNA, partial cds blastn 27133 545 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25700301 25700301 PRJNA399711_S_NODE_5962_length_405_cov_116.043478_g5820_i0 PRJNA399711 5962 405 116.043478 469.9760859 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 536 8.799999999999998e-148   NTclustered gi|1124902734|gb|AY812498.2| 6182 g5820 i0 98.675 52.037037037037 302 4 75 0 104 405 69 370 Schistosoma japonicum SJCHGC01615 protein mRNA, partial cds blastn 21075 536 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
25896547 25896547 PRJNA399711_S_NODE_19867_length_276_cov_5.711297_g19725_i0 PRJNA399711 19867 276 5.711297 15.76317972 Metazoa 33208 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|690502826|emb|LN050883.1| 99802 g19725 i0 100 0.507246376811594 28 0 10 0 12 39 5263 5236 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0049496 blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
26378825 26378825 PRJNA399711_S_NODE_18367_length_283_cov_1371973.715447_g18225_i0 PRJNA399711 18367 283 1371973.715447 3882685.61471501 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 195 4.1e-45   NTclustered gi|56757963|gb|AY815390.1| 6182 g18225 i0 98.198 71.3074204946996 111 2 40 0 87 197 1728 1618 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 20180 195 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
26379883 26379883 PRJNA399711_S_NODE_40231_length_215_cov_6.348315_g40089_i0 PRJNA399711 40231 215 6.348315 13.64887725 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 387 4.57e-103   NTclustered gi|60698688|gb|AY915747.1| 6182 g40089 i0 99.07 2.38604651162791 215 2 100 0 1 215 360 146 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 513 387 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
26379886 26379886 PRJNA399711_S_NODE_4039_length_456_cov_7.016706_g3906_i0 PRJNA399711 4039 456 7.016706 31.99617936 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 436 1.04e-117   NTclustered gi|60598655|gb|AY809988.1| 6182 g3906 i0 98.024 112.80701754386 253 1 100 1 208 456 639 387 Schistosoma japonicum SJCHGC09533 protein mRNA, partial cds blastn 51440 436 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
26381059 26381059 PRJNA399711_S_NODE_72463_length_174_cov_2.518248_g72321_i0 PRJNA399711 72463 174 2.518248 4.38175152 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 75 3.12e-9   NTclustered gi|60689473|gb|AY915240.1| 6182 g72321 i0 95.652 31.1551724137931 46 2 26 0 129 174 615 660 Schistosoma japonicum SJCHGC03782 protein mRNA, complete cds blastn 5421 75 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;