RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA399711" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA399711 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26244479 26244479 PRJNA399711_S_NODE_50638_length_198_cov_3.484472_g50496_i0 PRJNA399711 50638 198 3.484472 6.89925456 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.017   NTclustered gi|1229174390|ref|XM_022244918.1| 133434 g50496 i0 100 0.424242424242424 28 0 14 0 27 54 2117 2144 PREDICTED: Acanthaster planci nucleolin-like (LOC110984585), transcript variant X2, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
26516807 26516807 PRJNA399711_S_NODE_58176_length_188_cov_5.887417_g58034_i0 PRJNA399711 58176 188 5.887417 11.06834396 Anneissia japonica 1529436 Echinodermata other_Eukaryota 52.8 0.016   NTclustered gi|1826667509|ref|XM_033265473.1| 1529436 g58034 i0 100 0.297872340425532 28 0 15 0 83 110 783 810 PREDICTED: Anneissia japonica 39S ribosomal protein L27, mitochondrial-like (LOC117120446), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;