contig_metadata
51 rows where analysis = "blastn", bioproject = "PRJNA399133" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 413110 | 413110 | PRJNA399133_P_NODE_12161_length_152_cov_1.307692_g12073_i0 | PRJNA399133 | 12161 | 152 | 1.307692 | 1.98769184 | Mus musculus | 10090 | Chordata | Chordata | 281 | 1.46e-71 | NTclustered | gi|23476732|emb|AL845173.4| | 10090 | g12073 | i0 | 100 | 2.32894736842105 | 152 | 0 | 100 | 0 | 1 | 152 | 82462 | 82613 | Mouse DNA sequence from clone RP23-322G1 on chromosome 2, complete sequence | blastn | 354 | 281 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 413189 | 413189 | PRJNA399133_P_NODE_4721_length_233_cov_2.439394_g4633_i0 | PRJNA399133 | 4721 | 233 | 2.439394 | 5.68378802 | Equus caballus | 9796 | Chordata | Chordata | 403 | 4.9999999999999985e-108 | NTclustered | gi|242112907|emb|FN419718.1| | 9796 | g4633 | i0 | 97.854 | 28.1759656652361 | 233 | 5 | 100 | 0 | 1 | 233 | 678 | 446 | Equus caballus microsatellite DNA, locus ABGe19266 | blastn | 6565 | 403 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Perissodactyla | Equidae | Equus | Equus caballus | |
| 1080916 | 1080916 | PRJNA399133_P_NODE_4201_length_247_cov_1.292453_g4113_i0 | PRJNA399133 | 4201 | 247 | 1.292453 | 3.19235891 | Bovidae | 9895 | Chordata | Chordata | 407 | 4.14e-109 | NTclustered | gi|288557379|gb|AC238844.5| | 9913 | g4113 | i0 | 96.356 | 348.736842105263 | 247 | 9 | 100 | 0 | 1 | 247 | 47187 | 47433 | Bos taurus Y Chr BAC CH240-259D2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence | blastn | 86138 | 407 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 1080930 | 1080930 | PRJNA399133_P_NODE_5241_length_229_cov_1.773196_g5153_i0 | PRJNA399133 | 5241 | 229 | 1.773196 | 4.06061884 | Mus | 10088 | Chordata | Chordata | 139 | 1.52e-28 | NTclustered | gi|1679814537|ref|XM_021176680.2| | 10089 | g5153 | i0 | 100 | 10.0393013100437 | 75 | 0 | 33 | 0 | 1 | 75 | 4589 | 4663 | PREDICTED: Mus caroli TBC1 domain family member 9B (Tbc1d9b), transcript variant X1, mRNA | blastn | 2299 | 139 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 1688105 | 1688105 | PRJNA399133_P_NODE_5142_length_229_cov_1.871134_g5054_i0 | PRJNA399133 | 5142 | 229 | 1.871134 | 4.28489686 | Sus scrofa | 9823 | Chordata | Chordata | 128 | 3.3e-25 | NTclustered | gi|4680299|gb|AF123434.1|AF123434 | 9823 | g5054 | i0 | 97.368 | 8.46724890829694 | 76 | 1 | 33 | 1 | 1 | 75 | 1254 | 1329 | Sus scrofa clone pSac3.3-1 centromeric repeat region | blastn | 1939 | 128 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 1688175 | 1688175 | PRJNA399133_P_NODE_8422_length_181_cov_1.089041_g8334_i0 | PRJNA399133 | 8422 | 181 | 1.089041 | 1.97116421 | Bos taurus | 9913 | Chordata | Chordata | 305 | 1.07e-78 | NTclustered | gi|227452814|gb|AC226437.5| | 9913 | g8334 | i0 | 96.757 | 248.756906077348 | 185 | 2 | 100 | 1 | 1 | 181 | 72200 | 72016 | Bos taurus Y Chr BAC CH240-278G19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence | blastn | 45025 | 305 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 2356357 | 2356357 | PRJNA399133_P_NODE_9262_length_173_cov_1.159420_g9174_i0 | PRJNA399133 | 9262 | 173 | 1.15942 | 2.0057966 | root | 1 | Root_unresolved | Root_unresolved | 320 | 3.61e-83 | NTclustered | gi|1679811099|ref|XM_021175203.2| | 10089 | g9174 | i0 | 100 | 100 | 173 | 0 | 100 | 0 | 1 | 173 | 26 | 198 | PREDICTED: Mus caroli 40S ribosomal protein S29 (LOC110303960), mRNA | blastn | 17300 | 320 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 2964065 | 2964065 | PRJNA399133_P_NODE_6823_length_201_cov_1.548193_g6735_i0 | PRJNA399133 | 6823 | 201 | 1.548193 | 3.11186793 | Gallus gallus | 9031 | Chordata | Chordata | 209 | 9.8e-50 | NTclustered | gi|15341323|gb|AF401307.1|AF401307 | 9031 | g6735 | i0 | 85.5 | 16.9452736318408 | 200 | 29 | 99 | 0 | 1 | 200 | 123 | 322 | Gallus gallus clone pG728_T7-end CNM repeat sequence | blastn | 3406 | 209 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 2964096 | 2964096 | PRJNA399133_P_NODE_7903_length_186_cov_2.066225_g7815_i0 | PRJNA399133 | 7903 | 186 | 2.066225 | 3.8431785 | Bos taurus | 9913 | Chordata | Chordata | 333 | 5.069999999999999e-87 | NTclustered | gi|2587618203|ref|XR_009493738.1| | 9913 | g7815 | i0 | 98.93 | 241.629032258065 | 187 | 1 | 100 | 1 | 1 | 186 | 2526 | 2340 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA | blastn | 44943 | 333 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 2964154 | 2964154 | PRJNA399133_P_NODE_9983_length_166_cov_2.587786_g9895_i0 | PRJNA399133 | 9983 | 166 | 2.587786 | 4.29572476 | Sus scrofa | 9823 | Chordata | Chordata | 182 | 1.7e-41 | NTclustered | gi|2103|emb|X16513.1| | 9823 | g9895 | i0 | 87.037 | 10.1265060240964 | 162 | 19 | 100 | 2 | 1 | 161 | 1091 | 931 | Pig gender-neutral repetitive DNA | blastn | 1681 | 182 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 5516928 | 5516928 | PRJNA399133_P_NODE_1225_length_460_cov_3.440000_g1144_i0 | PRJNA399133 | 1225 | 460 | 3.44 | 15.824 | Bos taurus | 9913 | Chordata | Chordata | 850 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g1144 | i0 | 100 | 32.6065217391304 | 460 | 0 | 100 | 0 | 1 | 460 | 5563 | 6022 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 14999 | 850 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 5516967 | 5516967 | PRJNA399133_P_NODE_2745_length_301_cov_2.699248_g2657_i0 | PRJNA399133 | 2745 | 301 | 2.699248 | 8.12473648 | Mus musculus | 10090 | Chordata | Chordata | 224 | 5.609999999999999e-54 | NTclustered | gi|62185774|gb|BC092277.1| | 10090 | g2657 | i0 | 97.692 | 29.109634551495 | 130 | 3 | 64 | 0 | 117 | 246 | 3315 | 3186 | Mus musculus epidermal growth factor, mRNA (cDNA clone MGC:102520 IMAGE:4240429), complete cds | blastn | 8762 | 224 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5516980 | 5516980 | PRJNA399133_P_NODE_3505_length_269_cov_1.380342_g3417_i0 | PRJNA399133 | 3505 | 269 | 1.380342 | 3.71311998 | Mus musculus | 10090 | Chordata | Chordata | 497 | 2.63e-136 | NTclustered | gi|1720386620|ref|XM_030249006.1| | 10090 | g3417 | i0 | 100 | 92.271375464684 | 269 | 0 | 100 | 0 | 1 | 269 | 4247 | 3979 | PREDICTED: Mus musculus sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B (Sema5b), transcript variant X3, mRNA | blastn | 24821 | 497 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5517096 | 5517096 | PRJNA399133_P_NODE_8945_length_175_cov_2.750000_g8857_i0 | PRJNA399133 | 8945 | 175 | 2.75 | 4.8125 | Mus musculus | 10090 | Chordata | Chordata | 324 | 2.83e-84 | NTclustered | gi|66793493|gb|AC159711.8| | 10090 | g8857 | i0 | 100 | 98.3714285714286 | 175 | 0 | 100 | 0 | 1 | 175 | 163470 | 163644 | Mus musculus 10 BAC RP23-214N15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence | blastn | 17215 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5517099 | 5517099 | PRJNA399133_P_NODE_9165_length_173_cov_2.137681_g9077_i0 | PRJNA399133 | 9165 | 173 | 2.137681 | 3.69818813 | Canis lupus | 9612 | Chordata | Chordata | 320 | 3.61e-83 | NTclustered | gi|114145868|gb|AC186983.6| | 9615 | g9077 | i0 | 100 | 421.526011560694 | 173 | 0 | 100 | 0 | 1 | 173 | 121763 | 121591 | Canis Familiaris chromosome 30, clone XX-296K10, complete sequence | blastn | 72924 | 320 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 6183918 | 6183918 | PRJNA399133_P_NODE_1285_length_448_cov_2.469734_g1203_i0 | PRJNA399133 | 1285 | 448 | 2.469734 | 11.06440832 | root | 1 | Root_unresolved | Root_unresolved | 806 | 0 | NTclustered | gi|2587618131|ref|XR_009493723.1| | 9913 | g1203 | i0 | 99.107 | 233.973214285714 | 448 | 4 | 100 | 0 | 1 | 448 | 535 | 88 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344768), transcript variant X3, ncRNA | blastn | 104820 | 806 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 6790970 | 6790970 | PRJNA399133_P_NODE_3706_length_262_cov_1.352423_g3618_i0 | PRJNA399133 | 3706 | 262 | 1.352423 | 3.54334826 | Bos taurus | 9913 | Chordata | Chordata | 462 | 9.319999999999999e-126 | NTclustered | gi|2587617802|ref|XR_009493679.1| | 9913 | g3618 | i0 | 99.219 | 14.9312977099237 | 256 | 2 | 98 | 0 | 7 | 262 | 750 | 495 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344736), ncRNA | blastn | 3912 | 462 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 6791005 | 6791005 | PRJNA399133_P_NODE_546_length_718_cov_3.887262_g480_i0 | PRJNA399133 | 546 | 718 | 3.887262 | 27.91054116 | Bos taurus | 9913 | Chordata | Chordata | 1153 | 0 | NTclustered | gi|703|emb|X03116.1| | 9913 | g480 | i0 | 98.042 | 42.0738161559889 | 664 | 11 | 100 | 2 | 1 | 663 | 663 | 1 | Bovine satellite II DNA repeat unit | blastn | 30209 | 1153 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 8066598 | 8066598 | PRJNA399133_P_NODE_5227_length_229_cov_1.788660_g5139_i0 | PRJNA399133 | 5227 | 229 | 1.78866 | 4.0960314 | Mus musculus | 10090 | Chordata | Chordata | 139 | 1.52e-28 | NTclustered | gi|53380906|gb|AC140430.3| | 10090 | g5139 | i0 | 100 | 26.4541484716157 | 75 | 0 | 66 | 0 | 155 | 229 | 150412 | 150338 | Mus musculus BAC clone RP24-105B23 from 3, complete sequence | blastn | 6058 | 139 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8733601 | 8733601 | PRJNA399133_P_NODE_11067_length_159_cov_1.241935_g10979_i0 | PRJNA399133 | 11067 | 159 | 1.241935 | 1.97467665 | Bos | 9903 | Chordata | Chordata | 263 | 5.59e-66 | NTclustered | gi|2633865448|ref|XR_009736505.1| | 9906 | g10979 | i0 | 96.835 | 212.358490566038 | 158 | 4 | 99 | 1 | 3 | 159 | 3302 | 3145 | PREDICTED: Bos javanicus uncharacterized LOC133247807 (LOC133247807), ncRNA | blastn | 33765 | 265 | 0.992452830188679 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 8733732 | 8733732 | PRJNA399133_P_NODE_87_length_1574_cov_13.699805_g65_i0 | PRJNA399133 | 87 | 1574 | 13.699805 | 215.6349307 | Bos | 9903 | Chordata | Chordata | 2507 | 0 | NTclustered | gi|2633679423|ref|XR_009735267.1| | 9906 | g65 | i0 | 95.431 | 128.698856416773 | 1576 | 66 | 99 | 3 | 1 | 1572 | 1849 | 276 | PREDICTED: Bos javanicus uncharacterized LOC133244046 (LOC133244046), ncRNA | blastn | 202572 | 2529 | 0.991300909450376 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 9341364 | 9341364 | PRJNA399133_P_NODE_208_length_1132_cov_2.725615_g169_i0 | PRJNA399133 | 208 | 1132 | 2.725615 | 30.8539618 | Bos taurus | 9913 | Chordata | Chordata | 1157 | 0 | NTclustered | gi|2587618203|ref|XR_009493738.1| | 9913 | g169 | i0 | 98.622 | 81.1987632508834 | 653 | 9 | 58 | 0 | 480 | 1132 | 8710 | 8058 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA | blastn | 91917 | 1157 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 10008890 | 10008890 | PRJNA399133_P_NODE_12048_length_152_cov_2.418803_g11960_i0 | PRJNA399133 | 12048 | 152 | 2.418803 | 3.67658056 | Bos | 9903 | Chordata | Chordata | 276 | 6.770000000000001e-70 | NTclustered | gi|2587618203|ref|XR_009493738.1| | 9913 | g11960 | i0 | 99.342 | 132.789473684211 | 152 | 1 | 100 | 0 | 1 | 152 | 7849 | 8000 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA | blastn | 20184 | 276 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 10008934 | 10008934 | PRJNA399133_P_NODE_428_length_827_cov_10.443182_g371_i0 | PRJNA399133 | 428 | 827 | 10.443182 | 86.36511514 | root | 1 | Root_unresolved | Root_unresolved | 885 | 0 | NTclustered | gi|2904934840|gb|PQ737764.1| | 10090 | g371 | i0 | 99.385 | 258.743651753325 | 488 | 3 | 59 | 0 | 340 | 827 | 31 | 518 | Mus musculus lncRNA174 lncRNA, complete sequence | blastn | 213981 | 891 | 0.993265993265993 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10008935 | 10008935 | PRJNA399133_P_NODE_4328_length_243_cov_2.730769_g4240_i0 | PRJNA399133 | 4328 | 243 | 2.730769 | 6.63576867 | Mus | 10088 | Chordata | Chordata | 449 | 6.65e-122 | NTclustered | gi|118200683|gb|EF108335.1| | 10090 | g4240 | i0 | 100 | 100 | 243 | 0 | 100 | 0 | 1 | 243 | 9117 | 9359 | Mus musculus strain C3H/HeJ mitochondrion, complete genome | blastn | 24300 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10008991 | 10008991 | PRJNA399133_P_NODE_8588_length_179_cov_1.631944_g8500_i0 | PRJNA399133 | 8588 | 179 | 1.631944 | 2.92117976 | Bos | 9903 | Chordata | Chordata | 259 | 8.32e-65 | NTclustered | gi|254553530|gb|AC226193.7| | 9913 | g8500 | i0 | 99.301 | 548.474860335196 | 143 | 1 | 99 | 0 | 37 | 179 | 100158 | 100300 | Bos taurus Y Chr BAC CH240-241J7 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence | blastn | 98177 | 259 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 11284140 | 11284140 | PRJNA399133_P_NODE_4349_length_243_cov_1.798077_g4261_i0 | PRJNA399133 | 4349 | 243 | 1.798077 | 4.36932711 | Canis | 9611 | Chordata | Chordata | 433 | 6.69e-117 | NTclustered | gi|110332046|gb|AC186975.3| | 9615 | g4261 | i0 | 98.765 | 316.765432098765 | 243 | 3 | 100 | 0 | 1 | 243 | 53385 | 53627 | Canis Familiaris chromosome 2, clone XX-252E5, complete sequence | blastn | 76974 | 433 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 11284157 | 11284157 | PRJNA399133_P_NODE_5349_length_229_cov_1.587629_g5261_i0 | PRJNA399133 | 5349 | 229 | 1.587629 | 3.63567041 | Mus | 10088 | Chordata | Chordata | 139 | 1.52e-28 | NTclustered | gi|1679809118|ref|XM_021174128.2| | 10089 | g5261 | i0 | 100 | 61.8777292576419 | 75 | 0 | 66 | 0 | 155 | 229 | 379 | 453 | PREDICTED: Mus caroli macrophage migration inhibitory factor (Mif), mRNA | blastn | 14170 | 139 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 11892034 | 11892034 | PRJNA399133_P_NODE_12530_length_150_cov_0.947826_g12442_i0 | PRJNA399133 | 12530 | 150 | 0.947826 | 1.421739 | Canis lupus | 9612 | Chordata | Chordata | 187 | 3.209999999999999e-43 | NTclustered | gi|124244146|gb|AC188653.9| | 9615 | g12442 | i0 | 92.969 | 124.36 | 128 | 9 | 85 | 0 | 20 | 147 | 212223 | 212096 | Canis familiaris chromosome 20, clone XX-436O14, complete sequence | blastn | 18654 | 187 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 13166960 | 13166960 | PRJNA399133_P_NODE_11871_length_154_cov_0.957983_g11783_i0 | PRJNA399133 | 11871 | 154 | 0.957983 | 1.47529382 | Canis lupus | 9612 | Chordata | Chordata | 279 | 5.33e-71 | NTclustered | gi|45504253|gb|AC147707.5| | 9615 | g11783 | i0 | 99.351 | 197.331168831169 | 154 | 1 | 100 | 0 | 1 | 154 | 147618 | 147465 | Canis Familiaris, clone XX-10C7, complete sequence | blastn | 30389 | 279 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 13167049 | 13167049 | PRJNA399133_P_NODE_4531_length_238_cov_3.108374_g4443_i0 | PRJNA399133 | 4531 | 238 | 3.108374 | 7.39793012 | Bos taurus | 9913 | Chordata | Chordata | 339 | 1.4699999999999999e-88 | NTclustered | gi|226437718|gb|AC150860.6| | 9913 | g4443 | i0 | 92.437 | 1288.70168067227 | 238 | 16 | 100 | 1 | 1 | 238 | 38399 | 38634 | Bos taurus BAC CH240-424I20 (Children's Hospital Oakland Research Institute Bovine BAC Library complete sequence | blastn | 306711 | 339 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 14442086 | 14442086 | PRJNA399133_P_NODE_10212_length_164_cov_6.565891_g10124_i0 | PRJNA399133 | 10212 | 164 | 6.565891 | 10.76806124 | Mus musculus | 10090 | Chordata | Chordata | 110 | 8.01e-20 | NTclustered | gi|38304976|gb|AY457256.1| | 10090 | g10124 | i0 | 94.366 | 0.432926829268293 | 71 | 4 | 43 | 0 | 94 | 164 | 1 | 71 | Mus musculus clone 227 CTCF-binding site sequence | blastn | 71 | 110 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15108625 | 15108625 | PRJNA399133_P_NODE_4772_length_232_cov_2.162437_g4684_i0 | PRJNA399133 | 4772 | 232 | 2.162437 | 5.01685384 | Bos | 9903 | Chordata | Chordata | 363 | 8.439999999999997e-96 | NTclustered | gi|1068294018|gb|KX592814.1| | 9913 | g4684 | i0 | 96.396 | 432.034482758621 | 222 | 5 | 99 | 2 | 10 | 229 | 10436170 | 10435950 | Bos taurus isolate Dominette_000065F genomic sequence | blastn | 100232 | 363 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 16383178 | 16383178 | PRJNA399133_P_NODE_10473_length_163_cov_1.421875_g10385_i0 | PRJNA399133 | 10473 | 163 | 1.421875 | 2.31765625 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 291 | 2.64e-74 | NTclustered | gi|2633714386|ref|XM_061435545.1| | 9906 | g10385 | i0 | 98.773 | 197.355828220859 | 163 | 2 | 100 | 0 | 1 | 163 | 857 | 695 | PREDICTED: Bos javanicus LINE1 type transposase domain containing 1 (L1TD1), mRNA | blastn | 32169 | 291 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 16990729 | 16990729 | PRJNA399133_P_NODE_1474_length_415_cov_1.613158_g1390_i0 | PRJNA399133 | 1474 | 415 | 1.613158 | 6.6946057 | Dromaius novaehollandiae | 8790 | Chordata | Chordata | 52.8 | 0.04 | NTclustered | gi|2718568042|ref|XM_064501802.1| | 8790 | g1390 | i0 | 94.286 | 0.337349397590361 | 35 | 1 | 8 | 1 | 122 | 155 | 1400 | 1366 | PREDICTED: Dromaius novaehollandiae peroxisomal multifunctional enzyme type 2-like (LOC135324835), transcript variant X2, mRNA | blastn | 140 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Casuariiformes | Dromaiidae | Dromaius | Dromaius novaehollandiae | |
| 16990789 | 16990789 | PRJNA399133_P_NODE_5134_length_229_cov_1.881443_g5046_i0 | PRJNA399133 | 5134 | 229 | 1.881443 | 4.30850447 | Mus musculus | 10090 | Chordata | Chordata | 139 | 1.52e-28 | NTclustered | gi|22204668|emb|AL805949.4| | 10090 | g5046 | i0 | 100 | 35.2445414847162 | 75 | 0 | 66 | 0 | 155 | 229 | 44468 | 44394 | Mouse DNA sequence from clone RP23-424K9 on chromosome 4, complete sequence | blastn | 8071 | 139 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16990889 | 16990889 | PRJNA399133_P_NODE_9594_length_170_cov_1.481481_g9506_i0 | PRJNA399133 | 9594 | 170 | 1.481481 | 2.5185177 | Mus musculus | 10090 | Chordata | Chordata | 315 | 1.64e-81 | NTclustered | gi|74138190|dbj|AK148498.1| | 10090 | g9506 | i0 | 100 | 29.1705882352941 | 170 | 0 | 100 | 0 | 1 | 170 | 1907 | 2076 | Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820012D20 product:secretogranin III, full insert sequence | blastn | 4959 | 315 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17658457 | 17658457 | PRJNA399133_P_NODE_774_length_594_cov_2.361360_g699_i0 | PRJNA399133 | 774 | 594 | 2.36136 | 14.0264784 | root | 1 | Root_unresolved | Root_unresolved | 523 | 1.0399999999999996e-143 | NTclustered | gi|693|emb|V00115.1| | 9913 | g699 | i0 | 98.644 | 80.6835016835017 | 295 | 4 | 94 | 0 | 2 | 296 | 1209 | 915 | Bos taurus 1.711a satellite DNA with insert INS-1.711A. (extends from base 501 to 1151) | blastn | 47926 | 523 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 18932365 | 18932365 | PRJNA399133_P_NODE_5215_length_229_cov_1.793814_g5127_i0 | PRJNA399133 | 5215 | 229 | 1.793814 | 4.10783406 | Bovidae | 9895 | Chordata | Chordata | 113 | 9.24e-21 | NTclustered | gi|2303549385|gb|MZ099430.1| | 9940 | g5127 | i0 | 97.015 | 32.2838427947598 | 67 | 2 | 29 | 0 | 9 | 75 | 337 | 403 | Ovis aries isolate Tibetan_sheep9-B-COI-3.seq cytochrome c oxidase subunit I (COI) gene, partial sequence; nuclear copy of mitochondrial gene | blastn | 7393 | 113 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Ovis | Ovis aries | |
| 18932416 | 18932416 | PRJNA399133_P_NODE_8275_length_182_cov_1.952381_g8187_i0 | PRJNA399133 | 8275 | 182 | 1.952381 | 3.55333342 | Bovidae | 9895 | Chordata | Chordata | 169 | 1.4699999999999998e-37 | NTclustered | gi|2587655351|ref|XM_059877944.1| | 9913 | g8187 | i0 | 97.938 | 335.115384615385 | 97 | 2 | 94 | 0 | 12 | 108 | 2825 | 2729 | PREDICTED: Bos taurus uncharacterized protein (LOC112442547), mRNA | blastn | 60991 | 169 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 18932444 | 18932444 | PRJNA399133_P_NODE_9715_length_169_cov_1.313433_g9627_i0 | PRJNA399133 | 9715 | 169 | 1.313433 | 2.21970177 | Bos | 9903 | Chordata | Chordata | 302 | 1.27e-77 | NTclustered | gi|2633679555|ref|XR_009735293.1| | 9906 | g9627 | i0 | 98.817 | 36.9289940828402 | 169 | 2 | 100 | 0 | 1 | 169 | 834 | 1002 | PREDICTED: Bos javanicus uncharacterized LOC133244066 (LOC133244066), ncRNA | blastn | 6241 | 302 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 20207031 | 20207031 | PRJNA399133_P_NODE_1796_length_375_cov_3.023529_g1709_i0 | PRJNA399133 | 1796 | 375 | 3.023529 | 11.33823375 | Mus | 10088 | Chordata | Chordata | 536 | 8.079999999999997e-148 | NTclustered | gi|937346083|ref|NM_001315488.1| | 10090 | g1709 | i0 | 100 | 51.4106666666667 | 290 | 0 | 100 | 0 | 86 | 375 | 3289 | 3578 | Mus musculus insulin-like growth factor 2 (Igf2), transcript variant 4, mRNA | blastn | 19279 | 536 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20814814 | 20814814 | PRJNA399133_P_NODE_1477_length_414_cov_2.408971_g1393_i0 | PRJNA399133 | 1477 | 414 | 2.408971 | 9.97313994 | Bos taurus | 9913 | Chordata | Chordata | 752 | 0 | NTclustered | gi|2587618129|ref|XR_009493721.1| | 9913 | g1393 | i0 | 99.756 | 58.4444444444444 | 410 | 1 | 99 | 0 | 5 | 414 | 3338 | 2929 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344768), transcript variant X1, ncRNA | blastn | 24196 | 752 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 20814884 | 20814884 | PRJNA399133_P_NODE_4997_length_229_cov_2.097938_g4909_i0 | PRJNA399133 | 4997 | 229 | 2.097938 | 4.80427802 | Mus musculus | 10090 | Chordata | Chordata | 139 | 1.52e-28 | NTclustered | gi|82779821|gb|AC158219.4| | 10090 | g4909 | i0 | 100 | 0.650655021834061 | 75 | 0 | 65 | 0 | 1 | 75 | 117496 | 117422 | Mus musculus chromosome 8, clone RP23-189N10, complete sequence | blastn | 149 | 139 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20814900 | 20814900 | PRJNA399133_P_NODE_6057_length_214_cov_1.240223_g5969_i0 | PRJNA399133 | 6057 | 214 | 1.240223 | 2.65407722 | Canis lupus | 9612 | Chordata | Chordata | 368 | 1.65e-97 | NTclustered | gi|124001728|gb|AC186969.13| | 9615 | g5969 | i0 | 98.104 | 239.68691588785 | 211 | 4 | 100 | 0 | 4 | 214 | 96543 | 96333 | Canis Familiaris chromosome 17, clone XX-222H14, complete sequence | blastn | 51293 | 368 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 22089710 | 22089710 | PRJNA399133_P_NODE_3278_length_277_cov_2.243802_g3190_i0 | PRJNA399133 | 3278 | 277 | 2.243802 | 6.21533154 | Mus musculus | 10090 | Chordata | Chordata | 507 | 4.53e-139 | NTclustered | gi|2548330513|gb|OQ915115.1| | 10090 | g3190 | i0 | 99.639 | 85.9494584837545 | 277 | 1 | 100 | 0 | 1 | 277 | 4819 | 5095 | Mus musculus clone BAC JH_40 45S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, 3' and 5' external transcribed spacers, complete sequence; and 18S ribosomal RNA gene, partial sequence | blastn | 23808 | 507 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22089750 | 22089750 | PRJNA399133_P_NODE_518_length_740_cov_3.441135_g455_i0 | PRJNA399133 | 518 | 740 | 3.441135 | 25.464399 | Canis lupus | 9612 | Chordata | Chordata | 1007 | 0 | NTclustered | gi|190576522|gb|AC186968.15| | 9615 | g455 | i0 | 91.316 | 49.0108108108108 | 737 | 64 | 99 | 0 | 1 | 737 | 65990 | 66726 | Canis familiaris chromosome 3, clone XX-219I19, complete sequence | blastn | 36268 | 1007 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 24032626 | 24032626 | PRJNA399133_P_NODE_4699_length_234_cov_1.597990_g4611_i0 | PRJNA399133 | 4699 | 234 | 1.59799 | 3.7392966 | root | 1 | Root_unresolved | Root_unresolved | 416 | 6.449999999999999e-112 | NTclustered | gi|163955276|gb|AC149769.4| | 9913 | g4611 | i0 | 99.561 | 257.209401709402 | 228 | 1 | 97 | 0 | 7 | 234 | 56374 | 56601 | Bos taurus BAC CH240-12E22 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence | blastn | 60187 | 416 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 24032695 | 24032695 | PRJNA399133_P_NODE_9319_length_172_cov_1.970803_g9231_i0 | PRJNA399133 | 9319 | 172 | 1.970803 | 3.38978116 | Bos | 9903 | Chordata | Chordata | 272 | 1.02e-68 | NTclustered | gi|89274849|gb|DQ405273.1| | 9913 | g9231 | i0 | 95.858 | 309.936046511628 | 169 | 6 | 98 | 1 | 5 | 172 | 17246 | 17078 | Bos taurus chromosome 9 clone BAC CHORI-21B24, complete sequence | blastn | 53309 | 272 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 24639682 | 24639682 | PRJNA399133_P_NODE_5920_length_217_cov_1.384615_g5832_i0 | PRJNA399133 | 5920 | 217 | 1.384615 | 3.00461455 | Bos taurus | 9913 | Chordata | Chordata | 401 | 1.6499999999999994e-107 | NTclustered | gi|313848847|emb|FQ482129.3| | 9913 | g5832 | i0 | 100 | 207.820276497696 | 217 | 0 | 100 | 0 | 1 | 217 | 63840 | 64056 | B.taurus DNA sequence from clone CH240-512N8, complete sequence | blastn | 45097 | 401 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 24639758 | 24639758 | PRJNA399133_P_NODE_9780_length_168_cov_2.120301_g9692_i0 | PRJNA399133 | 9780 | 168 | 2.120301 | 3.56210568 | Mus musculus | 10090 | Chordata | Chordata | 309 | 7.58e-80 | NTclustered | gi|194066|gb|M25389.1|MUSIAPP | 10090 | g9692 | i0 | 100 | 30.4464285714286 | 167 | 0 | 99 | 0 | 1 | 167 | 26 | 192 | Mouse islet amyloid polypeptide mRNA, complete cds | blastn | 5115 | 309 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;