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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA399133" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA399133 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1688054 1688054 PRJNA399133_P_NODE_2402_length_321_cov_1.842657_g2314_i0 PRJNA399133 2402 321 1.842657 5.91492897 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 58.4 6.47e-4   NTclustered gi|404352171|gb|JX283477.1| 5833 g2314 i0 100 31.9065420560748 31 0 10 0 282 312 134 164 Plasmodium falciparum isolate JGD39 merozoite surface protein 1 gene, partial cds blastn 10242 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
5516892 5516892 PRJNA399133_P_NODE_10645_length_162_cov_1.070866_g10557_i0 PRJNA399133 10645 162 1.070866 1.73480292 Ochromonas danica 2986 SAR_Eukaryotes SAR_Eukaryotes 217 4.5199999999999996e-52   NTclustered gi|238617656|gb|FJ973407.1| 2986 g10557 i0 90.741 94.0617283950617 162 15 100 0 1 162 337 176 Ochromonas danica strain ATCC 30004 alpha-tubulin (atub) gene, partial cds blastn 15238 217 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas danica
6790881 6790881 PRJNA399133_P_NODE_10506_length_163_cov_0.875000_g10418_i0 PRJNA399133 10506 163 0.875 1.42625 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 252 1.25e-62   NTclustered gi|1837628855|gb|MN158348.1| 5909 g10418 i0 94.479 8.04294478527607 163 9 100 0 1 163 5032 5194 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1311 252 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
12559461 12559461 PRJNA399133_P_NODE_10290_length_164_cov_1.697674_g10202_i0 PRJNA399133 10290 164 1.697674 2.78418536 Poterioochromonas 88166 SAR_Eukaryotes SAR_Eukaryotes 292 7.41e-75   NTclustered gi|323690576|gb|GU935635.1| 88167 g10202 i0 99.379 96.6158536585366 161 1 98 0 1 161 1410 1570 Poteriochroomonas malhamensis strain SAG 933.1c 28S ribosomal RNA gene, partial sequence blastn 15845 292 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae Poterioochromonas Poterioochromonas malhamensis
15715923 15715923 PRJNA399133_P_NODE_2733_length_302_cov_2.003745_g2645_i0 PRJNA399133 2733 302 2.003745 6.0513099 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 209 1.58e-49   NTclustered gi|673019759|ref|XM_008865619.1| 157072 g2645 i0 79.53 16.5430463576159 298 57 98 4 2 297 127 422 Aphanomyces invadans 40S ribosomal protein S23 mRNA blastn 4996 209 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
16383316 16383316 PRJNA399133_P_NODE_8253_length_182_cov_3.054422_g8165_i0 PRJNA399133 8253 182 3.054422 5.55904804 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 141 3.21e-29   NTclustered gi|404425902|gb|JX310031.1| 655661 g8165 i0 92.857 8.50549450549451 98 5 98 1 81 178 2409 2314 Wilbertia typica voucher PXM20100628 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1548 141 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Eurystomatellidae Wilbertia Wilbertia typica
18264830 18264830 PRJNA399133_P_NODE_135_length_1346_cov_3.454615_g107_i0 PRJNA399133 135 1346 3.454615 46.4991179 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 289359 SAR_Eukaryotes SAR_Eukaryotes 1916 0   NTclustered gi|53829555|gb|AY582830.1| 289359 g107 i0 96.88 39.4546805349183 1154 19 86 1 193 1346 1238 102 Stramenopile sp. ex Nuclearia delicatula CCAP1552/1 ef1a gene, partial cds blastn 53106 1916 1 Eukaryota Sar             Stramenopile sp. ex Nuclearia delicatula CCAP1552/1
18264880 18264880 PRJNA399133_P_NODE_3915_length_255_cov_1.986364_g3827_i0 PRJNA399133 3915 255 1.986364 5.0652282 Cercomonas agilis 310805 SAR_Eukaryotes SAR_Eukaryotes 259 1.27e-64   NTclustered gi|58414956|gb|AY748813.1| 310805 g3827 i0 86.441 133.580392156863 236 32 93 0 20 255 285 50 Cercomonas agilis polyubiquitin (UBQ) gene, partial cds blastn 34063 259 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas agilis
18932334 18932334 PRJNA399133_P_NODE_2755_length_301_cov_1.657895_g2667_i0 PRJNA399133 2755 301 1.657895 4.99026395 Hymenostomatida 31277 SAR_Eukaryotes SAR_Eukaryotes 529 1.0599999999999996e-145   NTclustered gi|1468800191|gb|MH822305.1| 5927 g2667 i0 98.339 100.019933554817 301 5 100 0 1 301 257 557 Dexiostoma campyla strain Tue2015_Dex small subunit ribosomal RNA gene, partial sequence blastn 30106 529 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Turaniellidae Dexiostoma Dexiostoma campyla
19539003 19539003 PRJNA399133_P_NODE_116_length_1431_cov_5.164756_g93_i0 PRJNA399133 116 1431 5.164756 73.90765836 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 2410 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g93 i0 97.042 1505.19566736548 1420 35 99 2 1 1418 1888 474 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 2153935 2410 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
19539005 19539005 PRJNA399133_P_NODE_11816_length_154_cov_1.344538_g11728_i0 PRJNA399133 11816 154 1.344538 2.07058852 Chrysolepidomonas dendrolepidota 64707 SAR_Eukaryotes SAR_Eukaryotes 171 3.34e-38   NTclustered gi|16326553|gb|AF409121.1| 64707 g11728 i0 92.5 36.2987012987013 120 8 77 1 36 154 3831 3712 Chrysolepidomonas dendrolepidota internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 5590 171 1 Eukaryota Sar     Chrysophyceae Chromulinales Chrysolepidomonadaceae Chrysolepidomonas Chrysolepidomonas dendrolepidota
20814853 20814853 PRJNA399133_P_NODE_3557_length_267_cov_2.099138_g3469_i0 PRJNA399133 3557 267 2.099138 5.60469846 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 483 7.31e-132   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g3469 i0 99.251 515.786516853933 267 2 100 0 1 267 222 488 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 137715 483 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
22089694 22089694 PRJNA399133_P_NODE_2558_length_312_cov_2.509025_g2470_i0 PRJNA399133 2558 312 2.509025 7.828158 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 268 2.66e-67   NTclustered gi|657012367|gb|KF302531.1| 2850 g2470 i0 84.477 24.4679487179487 277 37 88 6 39 312 16 289 Phaeodactylum tricornutum clone C443 40S ribosomal protein mRNA, partial cds blastn 7634 268 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
23365347 23365347 PRJNA399133_P_NODE_4679_length_234_cov_2.507538_g4591_i0 PRJNA399133 4679 234 2.507538 5.86763892 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 427 2.9799999999999993e-115   NTclustered gi|238617602|gb|FJ973377.1| 188950 g4591 i0 99.573 88.8589743589744 234 1 100 0 1 234 93 326 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 20793 427 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24639735 24639735 PRJNA399133_P_NODE_8520_length_179_cov_4.118056_g8432_i0 PRJNA399133 8520 179 4.118056 7.37132024 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 331 1.74e-86   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8432 i0 100 59.4301675977654 179 0 100 0 1 179 1651 1473 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 10638 331 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;