RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA399133" and tax_clade = "Luna-1 subcluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 3 ✖

bioproject 1

  • PRJNA399133 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2963923 2963923 PRJNA399133_P_NODE_10563_length_162_cov_1.889764_g10475_i0 PRJNA399133 10563 162 1.889764 3.06141768 Rhodoluna sp. KAS3 942880 Bacteria Bacteria 126 7.83e-25   NTclustered gi|2318877619|dbj|AP026910.1| 942880 g10475 i0 82.857 4.31481481481481 140 24 86 0 7 146 1246186 1246047 Rhodoluna sp. KAS3 DNA, complete genome blastn 699 126 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna sp. KAS3
11284191 11284191 PRJNA399133_P_NODE_7589_length_190_cov_2.561290_g7501_i0 PRJNA399133 7589 190 2.56129 4.866451 Microbacteriaceae 85023 Bacteria Bacteria 91.6 3.46e-14   NTclustered gi|1850312474|gb|CP054056.1| 2499157 g7501 i0 100 14.3210526315789 49 0 26 0 142 190 603280 603232 Aquiluna borgnonia strain 15G-AUS-rot chromosome, complete genome blastn 2721 91.6 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna borgnonia
16990690 16990690 PRJNA399133_P_NODE_10934_length_160_cov_0.960000_g10846_i0 PRJNA399133 10934 160 0.96 1.536 Aquiluna sp. KACHI24 2968831 Bacteria Bacteria 246 5.67e-61   NTclustered gi|2283401075|dbj|AP026677.1| 2968831 g10846 i0 94.375 6.96875 160 9 100 0 1 160 185634 185793 Aquiluna sp. KACHI24 DNA, complete genome blastn 1115 246 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp. KACHI24

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;