RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA397736" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA397736 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2355332 2355332 PRJNA397736_S_NODE_1982_length_192_cov_31.049080_g1946_i0 PRJNA397736 1982 192 31.04908 59.6142336 Basidiomycota 5204 Fungi Fungi 331 1.9e-86   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1946 i0 99.451 112.703125 182 1 95 0 1 182 2830 2649 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 21639 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2962889 2962889 PRJNA397736_S_NODE_203_length_657_cov_17.073248_g185_i0 PRJNA397736 203 657 17.073248 112.17123936 Kwoniella shivajii 564305 Fungi Fungi 60.2 3.91e-4   NTclustered gi|2670911400|ref|XM_062933773.1| 564305 g185 i0 100 0.184170471841705 32 0 5 0 626 657 301 270 Kwoniella shivajii uncharacterized protein (IL334_002026), partial mRNA blastn 121 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella shivajii
8732698 8732698 PRJNA397736_S_NODE_927_length_296_cov_24.363296_g891_i0 PRJNA397736 927 296 24.363296 72.11535616 Malassezia 55193 Fungi Fungi 521 1.7399999999999995e-143   NTclustered gi|1042812810|gb|KT351778.1| 76775 g891 i0 98.639 99.2635135135135 294 4 99 0 3 296 312 19 Malassezia restricta isolate contig100_19323 26S ribosomal RNA gene, partial sequence blastn 29382 521 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15107650 15107650 PRJNA397736_S_NODE_2152_length_184_cov_10.825806_g2116_i0 PRJNA397736 2152 184 10.825806 19.91948304 Eukaryota 2759 Fungi Fungi 340 2.99e-89   NTclustered gi|2558627581|gb|OR405830.1| 76775 g2116 i0 100 102 184 0 100 0 1 184 320 503 Malassezia restricta strain GSVCC20Z3-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 18768 340 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15714819 15714819 PRJNA397736_S_NODE_733_length_340_cov_14.421222_g697_i0 PRJNA397736 733 340 14.421222 49.0321548 Malassezia restricta 76775 Fungi Fungi 590 5.499999999999999e-164   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g697 i0 97.947 88.3735294117647 341 6 100 1 1 340 3315 2975 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 30047 590 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17657492 17657492 PRJNA397736_S_NODE_1794_length_205_cov_16.886364_g1758_i0 PRJNA397736 1794 205 16.886364 34.6170462 Malassezia 55193 Fungi Fungi 374 3.3599999999999997e-99   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g1758 i0 99.512 103.843902439024 205 1 100 0 1 205 2625 2421 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 21288 374 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22756866 22756866 PRJNA397736_S_NODE_2558_length_165_cov_19.058824_g2522_i0 PRJNA397736 2558 165 19.058824 31.4470596 Opisthokonta 33154 Fungi Fungi 300 4.46e-77   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2522 i0 99.394 99.5757575757576 165 1 100 0 1 165 843 679 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 16430 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24638533 24638533 PRJNA397736_S_NODE_380_length_481_cov_15.851770_g347_i0 PRJNA397736 380 481 15.85177 76.2470137 Malassezia restricta 76775 Fungi Fungi 887 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g347 i0 100 106.284823284823 480 0 99 0 2 481 1945 1466 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 51123 887 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;