RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA396510" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA396510 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
411890 411890 PRJNA396510_P_NODE_1701_length_407_cov_5.952514_g1632_i0 PRJNA396510 1701 407 5.952514 24.22673198 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 579 1.45e-160   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1632 i0 94.865 0.909090909090909 370 19 91 0 1 370 2179 2548 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 370 579 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
1686756 1686756 PRJNA396510_P_NODE_7402_length_217_cov_2.125000_g7333_i0 PRJNA396510 7402 217 2.125 4.61125 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 285 1.74e-72   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g7333 i0 90.323 1 217 21 100 0 1 217 4442 4226 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 217 285 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
3629932 3629932 PRJNA396510_P_NODE_13363_length_167_cov_0.864407_g13294_i0 PRJNA396510 13363 167 0.864407 1.44355969 Tequintavirus 187218 Viruses Viruses 303 3.5e-78   NTclustered gi|1345606666|gb|MF431734.1| 2024322 g13294 i0 99.401 85.9580838323353 167 1 100 0 1 167 92443 92277 Bacteriophage T5-like saus111K, complete genome blastn 14355 303 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus chee24
3629946 3629946 PRJNA396510_P_NODE_4263_length_275_cov_0.783186_g4194_i0 PRJNA396510 4263 275 0.783186 2.1537615 Tequintavirus 187218 Viruses Viruses 470 5.89e-128   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g4194 i0 97.455 101.021818181818 275 7 100 0 1 275 18526 18252 Salmonella phage SP3, partial genome blastn 27781 470 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
3629964 3629964 PRJNA396510_P_NODE_9823_length_192_cov_1.055944_g9754_i0 PRJNA396510 9823 192 1.055944 2.02741248 Tequintavirus 187218 Viruses Viruses 339 1.13e-88   NTclustered gi|1779416030|emb|LR597659.1| 2742946 g9754 i0 98.438 99.328125 192 3 100 0 1 192 70576 70767 Escherichia phage T5_ev212 genome assembly, chromosome: 1 blastn 19071 339 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Escherichia phage T5_ev212
4238968 4238968 PRJNA396510_P_NODE_204_length_1003_cov_3.525157_g151_i1 PRJNA396510 204 1003 3.525157 35.35732471 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 575 4.879999999999998e-159   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g151 i1 97.619 0.511465603190429 336 7 51 1 358 693 1105 771 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 513 575 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
4238984 4238984 PRJNA396510_P_NODE_8264_length_207_cov_1.613924_g8195_i0 PRJNA396510 8264 207 1.613924 3.34082268 Caudoviricetes sp. 2832643 Viruses Viruses 335 1.6099999999999997e-87   NTclustered gi|2914885844|gb|OR222395.1| 2832643 g8195 i0 97.449 1.80193236714976 196 5 95 0 1 196 26484 26289 MAG: Caudoviricetes sp. isolate MSP1008 genomic sequence blastn 373 335 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5515629 5515629 PRJNA396510_P_NODE_225_length_968_cov_3.130577_g151_i2 PRJNA396510 225 968 3.130577 30.30398536 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 431 1.08e-115   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g151 i2 89.881 0.495867768595041 336 33 50 1 358 693 1105 771 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 480 431 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
5515636 5515636 PRJNA396510_P_NODE_645_length_618_cov_4.182777_g584_i0 PRJNA396510 645 618 4.182777 25.84956186 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 778 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g584 i0 97.788 0.731391585760518 452 9 73 1 167 618 4 454 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 452 778 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
6789678 6789678 PRJNA396510_P_NODE_186_length_1041_cov_4.114919_g151_i0 PRJNA396510 186 1041 4.114919 42.83630679 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 444 1.4899999999999994e-119   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g151 i0 96.629 0.359269932756964 267 9 36 0 377 643 1442 1708 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 374 444 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
8065252 8065252 PRJNA396510_P_NODE_16707_length_161_cov_0.857143_g16638_i0 PRJNA396510 16707 161 0.857143 1.38000023 Tequintavirus SP3 2733991 Viruses Viruses 270 3.389999999999999e-68   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g16638 i0 96.894 99.0310559006211 161 5 100 0 1 161 20132 20292 Salmonella phage SP3, partial genome blastn 15944 270 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
9340068 9340068 PRJNA396510_P_NODE_1728_length_404_cov_1.760563_g1659_i0 PRJNA396510 1728 404 1.760563 7.11267452 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 213 1.68e-50   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1659 i0 94.245 0.344059405940594 139 8 34 0 266 404 3703 3841 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 139 213 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
10007235 10007235 PRJNA396510_P_NODE_3448_length_303_cov_1.196850_g3379_i0 PRJNA396510 3448 303 1.19685 3.6264555 Tequintavirus 187218 Viruses Viruses 555 1.7599999999999995e-153   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g3379 i0 99.67 99.947194719472 303 1 100 0 1 303 57166 56864 Salmonella phage SP3, partial genome blastn 30284 555 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
11890734 11890734 PRJNA396510_P_NODE_15950_length_162_cov_0.902655_g15881_i0 PRJNA396510 15950 162 0.902655 1.4623011 Shewanella phage FishSpeaker 2985553 Viruses Viruses 244 2.07e-60   NTclustered gi|2316690595|gb|OP589283.1| 2985553 g15881 i0 93.827 1 162 10 100 0 1 162 33343 33182 Shewanella phage FishSpeaker, complete genome blastn 162 244 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Shewanella phage FishSpeaker
11890740 11890740 PRJNA396510_P_NODE_3450_length_303_cov_0.909449_g3381_i0 PRJNA396510 3450 303 0.909449 2.75563047 Tequintavirus SP3 2733991 Viruses Viruses 555 1.7599999999999995e-153   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g3381 i0 99.67 99.986798679868 303 1 100 0 1 303 38517 38819 Salmonella phage SP3, partial genome blastn 30296 555 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
11890750 11890750 PRJNA396510_P_NODE_7250_length_219_cov_2.870588_g7181_i0 PRJNA396510 7250 219 2.870588 6.28658772 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 381 2.1799999999999996e-101   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g7181 i0 98.605 0.981735159817352 215 3 98 0 5 219 4704 4490 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 215 381 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
15106895 15106895 PRJNA396510_P_NODE_7732_length_214_cov_0.860606_g7663_i0 PRJNA396510 7732 214 0.860606 1.84169684 Tequintavirus 187218 Viruses Viruses 379 7.609999999999999e-101   NTclustered gi|971740341|ref|NC_028754.1| 1572715 g7663 i0 98.598 99.9205607476636 214 3 100 0 1 214 60532 60745 Salmonella phage Shivani, complete genome blastn 21383 379 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus shivani
16989364 16989364 PRJNA396510_P_NODE_1654_length_413_cov_1.958791_g1585_i0 PRJNA396510 1654 413 1.958791 8.08980683 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 374 7.46e-99   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1585 i0 90.747 0.680387409200969 281 24 68 2 1 280 5608 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 281 374 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16989365 16989365 PRJNA396510_P_NODE_34_length_1694_cov_2.693617_g30_i0 PRJNA396510 34 1694 2.693617 45.62987198 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 752 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g30 i0 97.291 0.40495867768595 443 12 40 0 960 1402 3703 4145 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 686 752 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16989366 16989366 PRJNA396510_P_NODE_4794_length_262_cov_0.957746_g4725_i0 PRJNA396510 4794 262 0.957746 2.50929452 Tequintavirus SP3 2733991 Viruses Viruses 479 9.249999999999999e-131   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g4725 i0 99.618 92.4083969465649 262 1 100 0 1 262 90628 90889 Salmonella phage SP3, partial genome blastn 24211 479 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
16989371 16989371 PRJNA396510_P_NODE_6874_length_224_cov_1.457143_g6805_i0 PRJNA396510 6874 224 1.457143 3.26400032 Tequintavirus SP3 2733991 Viruses Viruses 409 1.03e-109   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g6805 i0 100 99.1964285714286 221 0 99 0 4 224 19950 19730 Salmonella phage SP3, partial genome blastn 22220 409 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
17656777 17656777 PRJNA396510_P_NODE_9794_length_192_cov_1.356643_g9725_i0 PRJNA396510 9794 192 1.356643 2.60475456 Tequintavirus 187218 Viruses Viruses 355 1.13e-93   NTclustered gi|1842017380|ref|NC_048001.1| 2053625 g9725 i0 100 20.8541666666667 192 0 100 0 1 192 52481 52672 Salmonella phage SP3, partial genome blastn 4004 355 1 Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus SP3
19537818 19537818 PRJNA396510_P_NODE_8276_length_207_cov_1.291139_g8207_i0 PRJNA396510 8276 207 1.291139 2.67265773 Salmonella phage SP1a 2109652 Viruses Viruses 383 5.65e-102   NTclustered gi|1251987296|gb|MF774690.1| 2109652 g8207 i0 100 121.990338164251 207 0 100 0 1 207 1400 1194 Salmonella phage SP1a clone contig.00004 genomic sequence, sequence blastn 25252 383 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Salmonella phage SP1a
20205306 20205306 PRJNA396510_P_NODE_10136_length_189_cov_1.392857_g10067_i0 PRJNA396510 10136 189 1.392857 2.63249973 Tequintavirus 187218 Viruses Viruses 346 6.64e-91   NTclustered gi|1841997360|ref|NC_047754.1| 1655307 g10067 i0 100 98.984126984127 187 0 99 0 3 189 38432 38246 Escherichia phage APCEc03, complete genome blastn 18708 346 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Tequintavirus APCEc03
20813530 20813530 PRJNA396510_P_NODE_13357_length_167_cov_0.864407_g13288_i0 PRJNA396510 13357 167 0.864407 1.44355969 Salmonella phage SP1a 2109652 Viruses Viruses 303 3.5e-78   NTclustered gi|1251987181|gb|MF774688.1| 2109652 g13288 i0 99.401 91.8263473053892 167 1 100 0 1 167 7642 7808 Salmonella phage SP1a clone contig.00002, sequence blastn 15335 303 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Demerecviridae Tequintavirus Salmonella phage SP1a
20813545 20813545 PRJNA396510_P_NODE_4357_length_272_cov_1.919283_g4288_i0 PRJNA396510 4357 272 1.919283 5.22044976 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 348 2.8400000000000003e-91   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4288 i0 89.744 1.00367647058824 273 26 100 2 1 272 5833 6104 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 273 348 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
22088420 22088420 PRJNA396510_P_NODE_1278_length_460_cov_2.880779_g1209_i0 PRJNA396510 1278 460 2.880779 13.2515834 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 638 2.6899999999999994e-178   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1209 i0 91.522 1 460 39 100 0 1 460 6960 6501 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 460 638 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
22088430 22088430 PRJNA396510_P_NODE_18_length_2154_cov_4.161520_g14_i0 PRJNA396510 18 2154 4.16152 89.6391408 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2728 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g14 i0 95.591 0.919684308263695 1701 73 92 2 1 1700 7028 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 1981 2728 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
24638313 24638313 PRJNA396510_P_NODE_760_length_580_cov_3.719397_g151_i3 PRJNA396510 760 580 3.719397 21.5725026 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 294 8.62e-75   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g151 i3 92.647 0.351724137931034 204 15 35 0 377 580 1442 1645 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 204 294 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;