RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA396510" and tax_kingdom = "Fungi"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA396510 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
411892 411892 PRJNA396510_P_NODE_3601_length_296_cov_4.425101_g3532_i0 PRJNA396510 3601 296 4.425101 13.09829896 uncultured fungus 175245 Fungi Fungi 542 1.34e-149   NTclustered gi|2159202719|emb|OU941147.1| 175245 g3532 i0 99.662 91.7094594594595 296 1 100 0 1 296 1609 1904 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02441 blastn 27146 542 1 Eukaryota Opisthokonta Fungi           uncultured fungus
1079188 1079188 PRJNA396510_P_NODE_8781_length_202_cov_1.000000_g8712_i0 PRJNA396510 8781 202 1 2.02 Eukaryota 2759 Fungi Fungi 374 3.3e-99   NTclustered gi|8096248|dbj|AB021693.1| 5004 g8712 i0 100 100.009900990099 202 0 100 0 1 202 128 329 Sporidiobolus ruineniae gene for 18S ribosomal RNA, partial sequence blastn 20202 374 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodosporidiobolus Rhodosporidiobolus ruineniae
1686759 1686759 PRJNA396510_P_NODE_8902_length_201_cov_0.953947_g8833_i0 PRJNA396510 8902 201 0.953947 1.91743347 Malassezia furfur 55194 Fungi Fungi 361 2.5599999999999998e-95   NTclustered gi|2175024207|gb|OM190397.1| 55194 g8833 i0 99.005 84 201 2 100 0 1 201 625 825 Malassezia furfur strain SB910 small subunit ribosomal RNA gene, partial sequence blastn 16884 361 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
3629959 3629959 PRJNA396510_P_NODE_8303_length_207_cov_1.164557_g8234_i0 PRJNA396510 8303 207 1.164557 2.41063299 Ascomycota 4890 Fungi Fungi 383 5.65e-102   NTclustered gi|767813157|gb|KP114602.1| 29917 g8234 i0 100 100 207 0 100 0 1 207 59 265 Cladosporium cladosporioides strain PF3 large subunit ribosomal RNA gene, partial sequence blastn 20700 383 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
8731912 8731912 PRJNA396510_P_NODE_12107_length_174_cov_0.816000_g12038_i0 PRJNA396510 12107 174 0.816 1.41984 Opisthokonta 33154 Fungi Fungi 322 1.01e-83   NTclustered gi|915512607|gb|KP825390.1| 76775 g12038 i0 100 100 174 0 100 0 1 174 278 451 Malassezia restricta strain ISOSEB19F 28S ribosomal RNA gene, partial sequence blastn 17400 322 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
12557851 12557851 PRJNA396510_P_NODE_3470_length_302_cov_1.498024_g3401_i0 PRJNA396510 3470 302 1.498024 4.52403248 Malassezia 55193 Fungi Fungi 558 1.36e-154   NTclustered gi|915512619|gb|KP825402.1| 76775 g3401 i0 100 97.3344370860927 302 0 100 0 1 302 7 308 Malassezia restricta strain ISOSEB46F 28S ribosomal RNA gene, partial sequence blastn 29395 558 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13165676 13165676 PRJNA396510_P_NODE_2811_length_330_cov_3.729537_g2742_i0 PRJNA396510 2811 330 3.729537 12.3074721 uncultured fungus 175245 Fungi Fungi 560 4.17e-155   NTclustered gi|2159202719|emb|OU941147.1| 175245 g2742 i0 97.273 77.6636363636364 330 9 100 0 1 330 1084 755 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02441 blastn 25629 560 1 Eukaryota Opisthokonta Fungi           uncultured fungus
14440823 14440823 PRJNA396510_P_NODE_16052_length_162_cov_0.902655_g15983_i0 PRJNA396510 16052 162 0.902655 1.4623011 Malassezia globosa 76773 Fungi Fungi 287 3.39e-73   NTclustered gi|164656600|ref|XM_001729376.1| 425265 g15983 i0 98.758 1.45679012345679 161 2 99 0 2 162 1498 1658 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3463), partial mRNA blastn 236 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
17656770 17656770 PRJNA396510_P_NODE_7534_length_216_cov_1.203593_g7465_i0 PRJNA396510 7534 216 1.203593 2.59976088 Dothideomycetes 147541 Fungi Fungi 331 2.19e-86   NTclustered gi|908900564|gb|KT207688.1| 5599 g7465 i0 100 82.8703703703704 179 0 83 0 38 216 306 128 Alternaria alternata strain KUC21222 28S ribosomal RNA gene, partial sequence blastn 17900 331 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
19537800 19537800 PRJNA396510_P_NODE_15236_length_163_cov_0.894737_g15167_i0 PRJNA396510 15236 163 0.894737 1.45842131 Malassezia restricta 76775 Fungi Fungi 291 2.64e-74   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g15167 i0 98.773 28.0858895705521 163 2 100 0 1 163 1840 1678 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 4578 291 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22088424 22088424 PRJNA396510_P_NODE_15558_length_163_cov_0.894737_g15489_i0 PRJNA396510 15558 163 0.894737 1.45842131 Moniliophthora roreri 221103 Fungi Fungi 58.4 2.92e-4   NTclustered gi|330339441|ref|NC_015400.1| 221103 g15489 i0 97.143 0.214723926380368 35 0 21 1 82 116 33616 33649 Moniliophthora roreri mitochondrion, complete genome blastn 35 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Marasmiaceae Moniliophthora Moniliophthora roreri
25305297 25305297 PRJNA396510_P_NODE_10180_length_189_cov_1.028571_g10111_i0 PRJNA396510 10180 189 1.028571 1.94399919 Colletotrichum 5455 Fungi Fungi 254 4.14e-63   NTclustered gi|1150313177|gb|KX885104.1| 474922 g10111 i0 95.031 85.0476190476191 161 8 85 0 29 189 26043 25883 Colletotrichum gloeosporioides strain LQ33 mitochondrion, complete genome blastn 16074 254 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum gloeosporioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;