RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA395690" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA395690 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5515368 5515368 PRJNA395690_P_NODE_2685_length_477_cov_1.859813_g2537_i0 PRJNA395690 2685 477 1.859813 8.87130801 Entomophthoraceae sp. ARSEF 7942 423453 Fungi Fungi 165 5.72e-36   NTclustered gi|145307981|gb|EF392517.1| 423453 g2537 i0 90.476 17.9350104821803 126 11 26 1 350 474 17 142 Entomophthoraceae sp. ARSEF 7942 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 8555 165 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae   Entomophthoraceae sp. ARSEF 7942
13165280 13165280 PRJNA395690_P_NODE_15311_length_208_cov_0.962264_g15159_i0 PRJNA395690 15311 208 0.962264 2.00150912 Coemansia reversa 61392 Fungi Fungi 128 2.94e-25   NTclustered gi|358030855|dbj|AB609161.1| 61392 g15159 i0 79.781 16.875 183 31 87 5 4 183 1511 1332 Coemansia reversa EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 1564 blastn 3510 128 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia reversa
16381527 16381527 PRJNA395690_P_NODE_6753_length_310_cov_2.226054_g6601_i0 PRJNA395690 6753 310 2.226054 6.9007674 Ancylistaceae 34486 Fungi Fungi 265 3.4199999999999996e-66   NTclustered gi|2032035963|gb|MW795364.1| 76012 g6601 i0 84.249 85.0741935483871 273 41 88 2 15 286 34583 34312 Neoconidiobolus thromboides strain ATCC 12587 mitochondrion, complete genome blastn 26373 265 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides
22087933 22087933 PRJNA395690_P_NODE_1018_length_773_cov_3.950276_g897_i0 PRJNA395690 1018 773 3.950276 30.53563348 Conidiobolus polytocus 1167814 Fungi Fungi 296 3.24e-75   NTclustered gi|2127863542|ref|NC_058640.1| 1167814 g897 i0 79.767 32.0310478654593 430 70 55 11 45 466 5760 5340 Conidiobolus polytocus culture ATCC:12244 mitochondrion, complete genome blastn 24760 296 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus polytocus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;