RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA395690" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA395690 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15106703 15106703 PRJNA395690_P_NODE_23232_length_179_cov_1.207692_g23080_i0 PRJNA395690 23232 179 1.207692 2.16176868 root 1 Root_unresolved Root_unresolved 52.8 0.015   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g23080 i0 100 3.12849162011173 28 0 16 0 152 179 11043298 11043271 Anemonia sulcata genome assembly, chromosome: 9 blastn 560 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
18263114 18263114 PRJNA395690_P_NODE_12035_length_235_cov_1.096774_g11883_i0 PRJNA395690 12035 235 1.096774 2.5774189 Ceratomyxa ayami 1579381 Cnidaria other_Eukaryota 58.4 4.53e-4   NTclustered gi|730837045|gb|KM392429.1| 1579381 g11883 i0 100 0.374468085106383 31 0 13 0 200 230 1236 1206 Ceratomyxa ayami isolate LJ-Lepto 28S ribosomal RNA gene, partial sequence blastn 88 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa ayami

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;