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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA395690" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA395690 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
411513 411513 PRJNA395690_P_NODE_16981_length_197_cov_1.331081_g16829_i0 PRJNA395690 16981 197 1.331081 2.62222957 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 342 9.039999999999999e-90   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g16829 i0 97.97 48.4111675126904 197 4 100 0 1 197 565 761 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 9537 342 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
411559 411559 PRJNA395690_P_NODE_2121_length_534_cov_2.441237_g1974_i0 PRJNA395690 2121 534 2.441237 13.03620558 Paramecium gigas 2709424 SAR_Eukaryotes SAR_Eukaryotes 134 1.82e-26   NTclustered gi|2120474459|ref|NC_058286.1| 2709424 g1974 i0 92.473 32.4719101123596 93 7 17 0 207 299 1941 1849 Paramecium gigas mitochondrion, complete genome blastn 17340 134 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium gigas
5515193 5515193 PRJNA395690_P_NODE_12405_length_231_cov_2.241758_g12253_i0 PRJNA395690 12405 231 2.241758 5.17846098 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 115 2.6e-21   NTclustered gi|829192014|ref|XM_012799966.1| 312017 g12253 i0 88.421 1.81818181818182 95 11 41 0 48 142 125 219 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 420 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
13832588 13832588 PRJNA395690_P_NODE_7131_length_302_cov_31.268775_g6979_i0 PRJNA395690 7131 302 31.268775 94.4317005 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 558 1.36e-154   NTclustered gi|158147318|gb|EU047813.1| 151077 g6979 i0 100 58.7185430463576 302 0 100 0 1 302 357 56 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 17733 558 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13832591 13832591 PRJNA395690_P_NODE_7611_length_292_cov_17.827160_g7459_i0 PRJNA395690 7611 292 17.82716 52.0553072 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 538 1.6999999999999994e-148   NTclustered gi|530758434|gb|KF524393.1| 60850 g7459 i0 100 97.791095890411 291 0 99 0 2 292 586 296 Vorticella convallaria isolate Gzpop 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28555 538 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
14440370 14440370 PRJNA395690_P_NODE_15912_length_204_cov_0.987097_g15760_i0 PRJNA395690 15912 204 0.987097 2.01367788 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 82.4 2.27e-11   NTclustered gi|829188944|ref|XM_001031587.2| 312017 g15760 i0 80.952 0.514705882352941 105 18 51 2 8 111 179 76 Tetrahymena thermophila SB210 60S ribosomal L7Ae-like protein partial mRNA blastn 105 82.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14440600 14440600 PRJNA395690_P_NODE_30872_length_165_cov_0.879310_g30720_i0 PRJNA395690 30872 165 0.87931 1.4508615 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 217 4.619999999999999e-52   NTclustered gi|3550265|gb|AF079840.1|AF079840 5963 g30720 i0 90.361 1.00606060606061 166 14 100 2 1 165 237 73 Stentor coeruleus G protein alpha GS-like subunit mRNA, partial cds blastn 166 217 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
14440759 14440759 PRJNA395690_P_NODE_8092_length_284_cov_1.519149_g7940_i0 PRJNA395690 8092 284 1.519149 4.31438316 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 436 6.2e-118   NTclustered gi|300676719|gb|GQ377693.1| 151077 g7940 i0 94.366 1 284 16 100 0 1 284 410 693 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 284 436 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15106818 15106818 PRJNA395690_P_NODE_6052_length_326_cov_4.653430_g5902_i0 PRJNA395690 6052 326 4.65343 15.1701818 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 189 2.2399999999999992e-43   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5902 i0 96.491 1.04907975460123 114 4 35 0 213 326 3082 2969 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 342 189 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16989265 16989265 PRJNA395690_P_NODE_5174_length_350_cov_1.355482_g5025_i0 PRJNA395690 5174 350 1.355482 4.744187 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 625 1.5499999999999995e-174   NTclustered gi|300676714|gb|GQ377691.1| 151077 g5025 i0 98.86 51.6942857142857 351 3 100 1 1 350 93 443 Chilodonella uncinata rps22a (rps22a) mRNA, complete cds blastn 18093 625 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
17656640 17656640 PRJNA395690_P_NODE_28974_length_167_cov_0.864407_g28822_i0 PRJNA395690 28974 167 0.864407 1.44355969 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|363412153|gb|JN120227.1| 60850 g28822 i0 100 100.011976047904 167 0 100 0 1 167 57 223 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 16702 309 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
18263122 18263122 PRJNA395690_P_NODE_12775_length_228_cov_1.139665_g12623_i0 PRJNA395690 12775 228 1.139665 2.5984362 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 152 1.9499999999999998e-32   NTclustered gi|1004125725|gb|KU761582.1| 153251 g12623 i0 89.344 3.79385964912281 122 12 53 1 2 122 179 58 Cryptocaryon irritans isolate ND1410 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and intergenic spacer, complete sequence blastn 865 152 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans
18263470 18263470 PRJNA395690_P_NODE_495_length_1093_cov_1.757663_g414_i0 PRJNA395690 495 1093 1.757663 19.21125659 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1709 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g414 i0 96.777 28.4107959743824 1024 33 94 0 1 1024 182 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 31053 1709 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
20205183 20205183 PRJNA395690_P_NODE_25536_length_173_cov_1.645161_g25384_i0 PRJNA395690 25536 173 1.645161 2.84612853 Tetrahymenidae 291294 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|296207|emb|X71349.1| 5911 g25384 i0 100 0.664739884393064 28 0 16 0 27 54 62 89 T.thermophila organelle RNA for U3 snRNA blastn 115 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
22088006 22088006 PRJNA395690_P_NODE_15258_length_208_cov_1.283019_g15106_i0 PRJNA395690 15258 208 1.283019 2.66867952 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 350 5.77e-92   NTclustered gi|301014695|gb|GQ377692.1| 151077 g15106 i0 97.101 7.47596153846154 207 6 99 0 2 208 250 44 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 1555 350 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24030658 24030658 PRJNA395690_P_NODE_14279_length_215_cov_1.602410_g14127_i0 PRJNA395690 14279 215 1.60241 3.4451815 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 370 4.609999999999999e-98   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14127 i0 97.674 78.8837209302326 215 5 100 0 1 215 422 208 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16960 370 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24638245 24638245 PRJNA395690_P_NODE_8960_length_272_cov_1.596413_g8808_i0 PRJNA395690 8960 272 1.596413 4.34224336 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 405 1.66e-108   NTclustered gi|347439270|gb|JN111983.1| 151077 g8808 i0 93.727 34.9852941176471 271 16 99 1 1 270 632 902 Chilodonella uncinata strain USA_SC2 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 9516 405 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;