RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA395690" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA395690 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1686340 1686340 PRJNA395690_P_NODE_16542_length_199_cov_4.186667_g16390_i0 PRJNA395690 16542 199 4.186667 8.33146733 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 222 1.24e-53   NTclustered gi|2874253698|emb|OY969424.1| 1672391 g16390 i0 87.755 73.3668341708543 196 16 96 7 1 191 970606 970414 MAG: uncultured Chloroflexia bacterium isolate MFD06229.bin.c.1 genome assembly, chromosome: 1 blastn 14600 222 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
5515508 5515508 PRJNA395690_P_NODE_37205_length_152_cov_6.291262_g37052_i0 PRJNA395690 37205 152 6.291262 9.56271824 Anaerolineales bacterium 2073117 Bacteria Bacteria 222 8.95e-54   NTclustered gi|2621701347|emb|OY760067.1| 2073117 g37052 i0 96.296 327.578947368421 135 5 89 0 16 150 898100 897966 MAG: Anaerolineales bacterium isolate e1712b75-d4f6-4c5e-bc49-bbfdc0d5b476 genome assembly, chromosome: 2 blastn 49792 222 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
11890346 11890346 PRJNA395690_P_NODE_14270_length_215_cov_1.698795_g14118_i0 PRJNA395690 14270 215 1.698795 3.65240925 Chloroflexota bacterium 2026724 Bacteria Bacteria 239 1.36e-58   NTclustered gi|1985684846|gb|CP069394.1| 2026724 g14118 i0 89.062 6.91627906976744 192 21 89 0 24 215 1474158 1473967 Chloroflexi bacterium strain ZRK35 chromosome, complete genome blastn 1487 239 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
11890465 11890465 PRJNA395690_P_NODE_23730_length_178_cov_0.945736_g23578_i0 PRJNA395690 23730 178 0.945736 1.68341008 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 209 8.44e-50   NTclustered gi|470481958|ref|NR_076505.1| 357808 g23578 i0 92 7.23033707865169 150 10 84 2 9 157 1250 1398 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 1287 209 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
11890583 11890583 PRJNA395690_P_NODE_33890_length_163_cov_0.894737_g33738_i0 PRJNA395690 33890 163 0.894737 1.45842131 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 231 1.63e-56   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g33738 i0 92.169 24.5337423312883 166 9 100 3 1 163 1858847 1858683 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 3999 231 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
19537455 19537455 PRJNA395690_P_NODE_21076_length_184_cov_1.481481_g20924_i0 PRJNA395690 21076 184 1.481481 2.72592504 Anaerolineales bacterium 2073117 Bacteria Bacteria 67.6 5.6e-7   NTclustered gi|2556906889|gb|CP129483.1| 2073117 g20924 i0 82.895 46.5108695652174 76 12 41 1 27 101 2030671 2030596 MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome blastn 8558 67.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
20813463 20813463 PRJNA395690_P_NODE_6417_length_317_cov_3.582090_g6266_i0 PRJNA395690 6417 317 3.58209 11.3552253 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 172 2.18e-38   NTclustered gi|2893356046|emb|OZ220469.1| 3069543 g6266 i0 80.417 411.794952681388 240 35 76 9 70 309 2203535 2203762 MAG: Phototrophicaceae bacterium isolate 149760b3-584d-4ebc-81cd-1236e649b30c genome assembly, chromosome: 1 blastn 130539 172 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
23363693 23363693 PRJNA395690_P_NODE_21339_length_183_cov_1.925373_g21187_i0 PRJNA395690 21339 183 1.925373 3.52343259 uncultured Dehalococcoidia bacterium 498747 Bacteria Bacteria 52.8 0.016   NTclustered gi|2531963199|emb|OY282442.1| 498747 g21187 i0 92.105 0.207650273224044 38 2 20 1 49 85 1397452 1397489 MAG: uncultured Dehalococcoidia bacterium genome assembly, chromosome: 1 blastn 38 52.8 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       uncultured Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;