RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA395690" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA395690 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5515577 5515577 PRJNA395690_P_NODE_765_length_882_cov_4.207683_g655_i0 PRJNA395690 765 882 4.207683 37.11176406 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 760 0   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g655 i0 82.472 402.918367346939 890 134 99 20 1 880 598171 597294 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 355374 760 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
9339958 9339958 PRJNA395690_P_NODE_4868_length_360_cov_3.652733_g4719_i0 PRJNA395690 4868 360 3.652733 13.1498388 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 580 3.519999999999999e-161   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g4719 i0 96.328 142.938888888889 354 11 98 2 9 360 3681786 3682139 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 51458 580 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
14440652 14440652 PRJNA395690_P_NODE_35172_length_161_cov_3.160714_g35020_i0 PRJNA395690 35172 161 3.160714 5.08874954 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 237 3.44e-58   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g35020 i0 93.168 63.1055900621118 161 11 100 0 1 161 3682485 3682645 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 10160 237 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
18263270 18263270 PRJNA395690_P_NODE_2375_length_505_cov_3.679825_g2227_i0 PRJNA395690 2375 505 3.679825 18.58311625 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 429 1.95e-115   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g2227 i0 84.245 86.0950495049505 457 54 89 17 1 448 597101 597548 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 43478 429 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
20813441 20813441 PRJNA395690_P_NODE_4597_length_369_cov_3.153125_g4448_i0 PRJNA395690 4597 369 3.153125 11.63503125 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 625 1.6499999999999996e-174   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g4448 i0 97.29 40.8861788617886 369 9 100 1 1 369 3681305 3680938 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 15087 625 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;