RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA393181" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA393181 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6181512 6181512 PRJNA393181_S_NODE_29805_length_206_cov_1.544379_g29699_i0 PRJNA393181 29805 206 1.544379 3.18142074 Cladosporium 5498 Fungi Fungi 381 2.0199999999999994e-101   NTclustered gi|1401690641|gb|MH474001.1| 29917 g29699 i0 100 100 206 0 100 0 1 206 224 19 Cladosporium cladosporioides isolate CK1359 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20600 381 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
7456466 7456466 PRJNA393181_S_NODE_31586_length_198_cov_1.826087_g31480_i0 PRJNA393181 31586 198 1.826087 3.61565226 Dothideomycetes 147541 Fungi Fungi 361 2.51e-95   NTclustered gi|283827932|gb|FJ493209.2| 630509 g31480 i0 99.495 99.7626262626263 198 1 100 0 1 198 2134 1937 Phaeophleospora eugeniicola strain CPC 2558 28S large subunit ribosomal RNA gene, partial sequence blastn 19753 361 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Phaeophleospora Phaeophleospora eugeniicola
10614698 10614698 PRJNA393181_S_NODE_44329_length_158_cov_1.289256_g44223_i0 PRJNA393181 44329 158 1.289256 2.03702448 Cladosporium anthropophilum 1970646 Fungi Fungi 254 3.3400000000000003e-63   NTclustered gi|2216737164|ref|NC_061970.1| 1970646 g44223 i0 95.57 87.6329113924051 158 7 100 0 1 158 4738 4581 Cladosporium anthropophilum voucher KACC 49782 mitochondrion, complete genome blastn 13846 254 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium anthropophilum
13831865 13831865 PRJNA393181_S_NODE_22051_length_249_cov_1.292453_g21945_i0 PRJNA393181 22051 249 1.292453 3.21820797 Fusarium 5506 Fungi Fungi 182 2.75e-41   NTclustered gi|1070343524|ref|XM_018389999.1| 426428 g21945 i0 80.952 61.1044176706827 231 42 92 2 1 230 678 449 Fusarium oxysporum f. sp. lycopersici 4287 60S ribosomal protein L7 (FOXG_10571), mRNA blastn 15215 182 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium oxysporum
23363124 23363124 PRJNA393181_S_NODE_7839_length_426_cov_2.753213_g7733_i0 PRJNA393181 7839 426 2.753213 11.72868738 Diutina rugosa 5481 Fungi Fungi 52.8 0.041   NTclustered gi|1838467306|ref|XM_034154283.1| 5481 g7733 i0 92.105 3.03286384976526 38 2 9 1 186 223 120 156 Diutina rugosa uncharacterized protein (DIURU_000171), partial mRNA blastn 1292 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Diutina Diutina rugosa
24637255 24637255 PRJNA393181_S_NODE_45340_length_155_cov_2.940678_g45234_i0 PRJNA393181 45340 155 2.940678 4.5580509 Diaporthe batatas 748121 Fungi Fungi 82.4 1.63e-11   NTclustered gi|2124364152|ref|XM_044788593.1| 748121 g45234 i0 96 8.84516129032258 50 2 32 0 106 155 626 675 Diaporthe batatas uncharacterized protein (KVR01_004153), mRNA blastn 1371 82.4 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Diaporthales Diaporthaceae Diaporthe Diaporthe batatas

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;