RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA393181" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA393181 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1685679 1685679 PRJNA393181_S_NODE_43562_length_160_cov_1.170732_g43456_i0 PRJNA393181 43562 160 1.170732 1.8731712 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 58.4 2.85e-4   NTclustered gi|2621703383|emb|OY762492.1| 2026781 g43456 i0 100 0.19375 31 0 19 0 68 98 730352 730382 MAG: Candidatus Poribacteria bacterium isolate 99769213-57d3-4dda-a27c-563ac69bc0fb genome assembly, chromosome: 1 blastn 31 58.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
15713386 15713386 PRJNA393181_S_NODE_37893_length_175_cov_2.666667_g37787_i0 PRJNA393181 37893 175 2.666667 4.66666725 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 128 2.38e-25   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g37787 i0 82.781 13.3542857142857 151 18 83 6 30 175 2403868 2404015 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 2337 128 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
16988540 16988540 PRJNA393181_S_NODE_9734_length_386_cov_3.782235_g9628_i0 PRJNA393181 9734 386 3.782235 14.5994271 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 403 8.83e-108   NTclustered gi|2874254095|emb|OY970178.1| 2212470 g9628 i0 85.567 89.0181347150259 388 52 100 4 1 386 1825965 1826350 MAG: Candidatus Eisenbacteria bacterium isolate MFD05942.bin.c.1 genome assembly, chromosome: 1 blastn 34361 403 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
22086755 22086755 PRJNA393181_S_NODE_21338_length_253_cov_4.263889_g21232_i0 PRJNA393181 21338 253 4.263889 10.78763917 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 204 5.99e-48   NTclustered gi|2874254095|emb|OY970178.1| 2212470 g21232 i0 85.075 104.371541501976 201 28 79 2 53 252 270983 270784 MAG: Candidatus Eisenbacteria bacterium isolate MFD05942.bin.c.1 genome assembly, chromosome: 1 blastn 26406 204 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;