RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA390533" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA390533 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11888525 11888525 PRJNA390533_P_NODE_32930_length_224_cov_1.205405_g31903_i0 PRJNA390533 32930 224 1.205405 2.7001072 Orthonoravirus melanogastri 3060507 Viruses Viruses 375 1.04e-99   NTclustered gi|2322367320|gb|OK188768.1| 3071212 g31903 i0 98.592 45.9776785714286 213 2 95 1 1 212 7096 7308 Nora virus isolate SMN, complete genome blastn 10299 375 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Noraviridae Orthonoravirus Orthonoravirus melanogastri
15712609 15712609 PRJNA390533_P_NODE_633_length_1766_cov_39.468442_g509_i0 PRJNA390533 633 1766 39.468442 697.01268572 Cripavirus ropadi 3048297 Viruses Viruses 3144 0   NTclustered gi|1391852420|gb|MF535298.1| 66834 g509 i0 99.198 45.1092865232163 1745 12 99 2 22 1766 7905 9647 Rhopalosiphum padi virus nonstructural polyprotein gene, complete cds; and structural polyprotein gene, partial cds blastn 79663 3144 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus ropadi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;