contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJNA390533" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 409920 | 409920 | PRJNA390533_P_NODE_7001_length_740_cov_21.009986_g6274_i0 | PRJNA390533 | 7001 | 740 | 21.009986 | 155.4738964 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 1271 | 0 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g6274 | i0 | 99.015 | 582.404054054054 | 711 | 3 | 96 | 1 | 13 | 719 | 2297681 | 2298391 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 430979 | 1271 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 2960213 | 2960213 | PRJNA390533_P_NODE_12603_length_542_cov_3.087475_g11659_i0 | PRJNA390533 | 12603 | 542 | 3.087475 | 16.7341145 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 869 | 0 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g11659 | i0 | 95.446 | 4.12177121771218 | 549 | 17 | 100 | 4 | 1 | 542 | 792273 | 792820 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 2234 | 869 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 2960463 | 2960463 | PRJNA390533_P_NODE_33443_length_219_cov_3.494444_g32416_i0 | PRJNA390533 | 33443 | 219 | 3.494444 | 7.65283236 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 357 | 3.67e-94 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g32416 | i0 | 99.492 | 36.8812785388128 | 197 | 0 | 90 | 1 | 2 | 198 | 2361729 | 2361534 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 8077 | 357 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 2960513 | 2960513 | PRJNA390533_P_NODE_38363_length_188_cov_1.838926_g37336_i0 | PRJNA390533 | 38363 | 188 | 1.838926 | 3.45718088 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 331 | 1.85e-86 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g37336 | i0 | 100 | 363.303191489362 | 179 | 0 | 95 | 0 | 10 | 188 | 25324 | 25502 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 68301 | 331 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 4236803 | 4236803 | PRJNA390533_P_NODE_31504_length_237_cov_1.227273_g30477_i0 | PRJNA390533 | 31504 | 237 | 1.227273 | 2.90863701 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 392 | 1.0999999999999999e-104 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g30477 | i0 | 99.083 | 7.08860759493671 | 218 | 2 | 92 | 0 | 20 | 237 | 970382 | 970599 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 1680 | 392 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 9337858 | 9337858 | PRJNA390533_P_NODE_33788_length_217_cov_1.353933_g32761_i0 | PRJNA390533 | 33788 | 217 | 1.353933 | 2.93803461 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 398 | 2.14e-106 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g32761 | i0 | 100 | 0.990783410138249 | 215 | 0 | 99 | 0 | 1 | 215 | 973983 | 973769 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 215 | 398 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 13163537 | 13163537 | PRJNA390533_P_NODE_36331_length_199_cov_3.312500_g35304_i0 | PRJNA390533 | 36331 | 199 | 3.3125 | 6.591875 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 298 | 2.01e-76 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g35304 | i0 | 97.159 | 72.3668341708543 | 176 | 5 | 88 | 0 | 1 | 176 | 220632 | 220457 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 14401 | 298 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 15712224 | 15712224 | PRJNA390533_P_NODE_15973_length_459_cov_2.340476_g14967_i0 | PRJNA390533 | 15973 | 459 | 2.340476 | 10.74278484 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 363 | 1.8099999999999994e-95 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g14967 | i0 | 95.595 | 2.77777777777778 | 227 | 9 | 49 | 1 | 229 | 455 | 37883 | 38108 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 1275 | 363 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 17655691 | 17655691 | PRJNA390533_P_NODE_19514_length_393_cov_2.064972_g18492_i0 | PRJNA390533 | 19514 | 393 | 2.064972 | 8.11533996 | Cetobacterium | 180162 | Bacteria | Bacteria | 610 | 4.949999999999999e-170 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g18492 | i0 | 94.656 | 6.72773536895674 | 393 | 21 | 100 | 0 | 1 | 393 | 1869448 | 1869056 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 2644 | 610 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 19535492 | 19535492 | PRJNA390533_P_NODE_28356_length_272_cov_2.472103_g27329_i0 | PRJNA390533 | 28356 | 272 | 2.472103 | 6.72412016 | Sneathia sanguinegens | 40543 | Bacteria | Bacteria | 475 | 1.2499999999999999e-129 | NTclustered | gi|2769805188|gb|CP160095.1| | 40543 | g27329 | i0 | 98.162 | 4 | 272 | 5 | 100 | 0 | 1 | 272 | 1148291 | 1148562 | Sneathia sanguinegens strain CCUG 41628T chromosome, complete genome | blastn | 1088 | 475 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia sanguinegens | ||
| 20811236 | 20811236 | PRJNA390533_P_NODE_20757_length_373_cov_2.425150_g19733_i0 | PRJNA390533 | 20757 | 373 | 2.42515 | 9.0458095 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 363 | 1.4399999999999999e-95 | NTclustered | gi|1276709865|gb|CP024700.1| | 2663009 | g19733 | i0 | 100 | 53.5201072386059 | 196 | 0 | 69 | 0 | 178 | 373 | 630551 | 630746 | Fusobacterium pseudoperiodonticum strain KCOM 1263 chromosome, complete genome | blastn | 19963 | 363 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 20811418 | 20811418 | PRJNA390533_P_NODE_37137_length_195_cov_1.288462_g36110_i0 | PRJNA390533 | 37137 | 195 | 1.288462 | 2.5125009 | Sneathia sanguinegens | 40543 | Bacteria | Bacteria | 340 | 3.21e-89 | NTclustered | gi|2769805188|gb|CP160095.1| | 40543 | g36110 | i0 | 100 | 10.3794871794872 | 184 | 0 | 94 | 0 | 12 | 195 | 3419 | 3236 | Sneathia sanguinegens strain CCUG 41628T chromosome, complete genome | blastn | 2024 | 340 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia sanguinegens | ||
| 20811522 | 20811522 | PRJNA390533_P_NODE_48377_length_154_cov_2.095652_g47350_i0 | PRJNA390533 | 48377 | 154 | 2.095652 | 3.22730408 | uncultured Leptotrichia sp. | 159271 | Bacteria | Bacteria | 274 | 2.48e-69 | NTclustered | gi|571048574|gb|KF422121.1| | 159271 | g47350 | i0 | 98.701 | 93.3051948051948 | 154 | 2 | 100 | 0 | 1 | 154 | 19 | 172 | Uncultured Leptotrichia sp. clone VostokV6_rep_c139 genomic sequence | blastn | 14369 | 274 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | uncultured Leptotrichia sp. | ||
| 22086436 | 22086436 | PRJNA390533_P_NODE_9518_length_637_cov_2.700669_g8667_i0 | PRJNA390533 | 9518 | 637 | 2.700669 | 17.20326153 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 1005 | 0 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g8667 | i0 | 95.149 | 507.835164835165 | 639 | 27 | 100 | 4 | 1 | 637 | 308459 | 309095 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 323491 | 1005 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 24636157 | 24636157 | PRJNA390533_P_NODE_34240_length_214_cov_0.937143_g33213_i0 | PRJNA390533 | 34240 | 214 | 0.937143 | 2.00548602 | Sneathia vaginalis | 187101 | Bacteria | Bacteria | 390 | 3.519999999999999e-104 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g33213 | i0 | 99.533 | 1.14018691588785 | 214 | 1 | 100 | 0 | 1 | 214 | 973096 | 972883 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 244 | 390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;