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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA390533" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJNA390533 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1684335 1684335 PRJNA390533_P_NODE_10962_length_589_cov_7.243636_g10058_i0 PRJNA390533 10962 589 7.243636 42.66501604 Trebouxia sp. SL0000003 3350044 Plants Plants 219 5.42e-52   NTclustered gi|2917929690|emb|OZ234918.1| 3350044 g10058 i0 97.638 0.460101867572156 127 3 46 0 233 359 840768 840894 Trebouxia sp. SL0000003 genome assembly, chromosome: 13 blastn 271 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
2960293 2960293 PRJNA390533_P_NODE_17723_length_423_cov_4.526042_g16707_i0 PRJNA390533 17723 423 4.526042 19.14515766 Dunaliella salina 3046 Plants Plants 396 1.63e-105   NTclustered gi|333691274|gb|JF346103.1| 3046 g16707 i0 86.761 84.1560283687943 355 47 84 0 69 423 1435 1081 Dunaliella salina alpha-tubulin protein mRNA, complete cds blastn 35598 396 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
3628866 3628866 PRJNA390533_P_NODE_20983_length_369_cov_16.784848_g19959_i0 PRJNA390533 20983 369 16.784848 61.93608912 Jaagichlorella 2304164 Plants Plants 627 4.5799999999999996e-175   NTclustered gi|1802907791|gb|MT006212.1| 2304167 g19959 i0 99.422 93.0379403794038 346 1 93 1 4 348 2724 2379 Jaagichlorella africana strain FACHB-2423 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 34331 627 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Jaagichlorella Jaagichlorella africana
4236582 4236582 PRJNA390533_P_NODE_14524_length_491_cov_1097.674779_g13538_i0 PRJNA390533 14524 491 1097.674779 5389.58316489 Parietochloris pseudoalveolaris 3102 Plants Plants 525 2.3499999999999993e-144   NTclustered gi|725650801|ref|NC_025532.1| 3102 g13538 i0 93.277 116.659877800407 357 22 92 1 1 355 120084 119728 Ettlia pseudoalveolaris culture-collection UTEX:975 chloroplast, complete genome blastn 57280 525 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Parietochloris Parietochloris pseudoalveolaris
6787355 6787355 PRJNA390533_P_NODE_23466_length_333_cov_16.527211_g22442_i0 PRJNA390533 23466 333 16.527211 55.03561263 Diplosphaera sundellii 3135960 Plants Plants 339 2.15e-88   NTclustered gi|2878821371|gb|PQ563290.1| 3135960 g22442 i0 96.569 1.36936936936937 204 7 75 0 129 332 8115 8318 Diplosphaera sundellii mitochondrion, complete genome blastn 456 339 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Diplosphaera Diplosphaera sundellii
10613319 10613319 PRJNA390533_P_NODE_13129_length_527_cov_11.799180_g12168_i0 PRJNA390533 13129 527 11.79918 62.1816786 Chlorella vulgaris 3077 Plants Plants 412 2.0599999999999994e-110   NTclustered gi|77627727|dbj|AB237642.1| 3077 g12168 i0 90.031 61.6110056925996 321 29 61 3 209 527 2179 1860 Chlorella vulgaris NIES:227 gene for 28S ribosomal RNA, partial sequence blastn 32469 412 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
15712164 15712164 PRJNA390533_P_NODE_11893_length_562_cov_6.678776_g10966_i0 PRJNA390533 11893 562 6.678776 37.53472112 Trebouxia sp. SL0000003 3350044 Plants Plants 161 8.819999999999998e-35   NTclustered gi|2917929621|emb|OZ234909.1| 3350044 g10966 i0 88.806 0.238434163701068 134 12 24 2 411 544 1430871 1430741 Trebouxia sp. SL0000003 genome assembly, chromosome: 4 blastn 134 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
18261292 18261292 PRJNA390533_P_NODE_28135_length_275_cov_3.805085_g27108_i0 PRJNA390533 28135 275 3.805085 10.46398375 Trebouxia corticola 103875 Plants Plants 405 1.68e-108   NTclustered gi|922575253|gb|JQ921013.1| 103875 g27108 i0 94.636 96.9236363636364 261 14 95 0 15 275 1007 747 Trebouxia corticola strain UTEX 909 23S large subunit ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast blastn 26654 405 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia corticola
20811234 20811234 PRJNA390533_P_NODE_20597_length_376_cov_2.103858_g19573_i0 PRJNA390533 20597 376 2.103858 7.91050608 Trebouxia sp. SL0000003 3350044 Plants Plants 243 1.9800000000000001e-59   NTclustered gi|2917929693|emb|OZ234920.1| 3350044 g19573 i0 96 42.7739361702128 150 5 68 1 209 357 2271060 2271209 Trebouxia sp. SL0000003 genome assembly, chromosome: 15 blastn 16083 243 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
20811619 20811619 PRJNA390533_P_NODE_9577_length_635_cov_2.328859_g8723_i0 PRJNA390533 9577 635 2.328859 14.78825465 Coccomyxa subellipsoidea 248742 Plants Plants 141 1.31e-28   NTclustered gi|545362831|ref|XM_005646559.1| 574566 g8723 i0 84.138 0.420472440944882 145 23 23 0 322 466 319 175 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 267 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
22086018 22086018 PRJNA390533_P_NODE_18838_length_404_cov_2.380822_g17818_i0 PRJNA390533 18838 404 2.380822 9.61852088 Trebouxia sp. SL0000003 3350044 Plants Plants 239 2.77e-58   NTclustered gi|2917929619|emb|OZ234907.1| 3350044 g17818 i0 90.27 0.457920792079208 185 15 45 3 222 404 2063882 2064065 Trebouxia sp. SL0000003 genome assembly, chromosome: 2 blastn 185 239 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
23362061 23362061 PRJNA390533_P_NODE_7539_length_717_cov_27.390855_g6785_i0 PRJNA390533 7539 717 27.390855 196.39243035 Diplosphaera sundellii 3135960 Plants Plants 1110 0   NTclustered gi|2878821371|gb|PQ563290.1| 3135960 g6785 i0 95.546 37.6847977684798 696 28 97 1 22 717 6780 7472 Diplosphaera sundellii mitochondrion, complete genome blastn 27020 1110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Diplosphaera Diplosphaera sundellii
24636033 24636033 PRJNA390533_P_NODE_21420_length_363_cov_1.990741_g20396_i0 PRJNA390533 21420 363 1.990741 7.22638983 Trebouxia sp. SL0000003 3350044 Plants Plants 318 3.07e-82   NTclustered gi|2917930141|emb|OZ234926.1| 3350044 g20396 i0 96.842 26.7603305785124 190 6 77 0 1 190 110124 110313 Trebouxia sp. SL0000003 genome assembly, organelle: mitochondrion blastn 9714 318 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
24636132 24636132 PRJNA390533_P_NODE_31200_length_239_cov_3.570000_g30173_i0 PRJNA390533 31200 239 3.57 8.5323 Desmodesmus sp. 5 YCY-2023 3081737 Plants Plants 171 5.68e-38   NTclustered gi|2594811836|gb|OR566726.1| 3081737 g30173 i0 80.087 6.89958158995816 231 44 96 2 5 234 349 578 Desmodesmus sp. 5 YCY-2023 strain FBCC-A1293 ATP synthase beta subunit (atpB) gene, partial cds; chloroplast blastn 1649 171 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Desmodesmus Desmodesmus sp. 5 YCY-2023
25304314 25304314 PRJNA390533_P_NODE_34260_length_213_cov_4.413793_g33233_i0 PRJNA390533 34260 213 4.413793 9.40137909 Coccomyxa 41891 Plants Plants 292 1.01e-74   NTclustered gi|1360638129|gb|AC277064.1| 574566 g33233 i0 91.589 101.657276995305 214 14 100 4 1 213 578 368 Coccomyxa subellipsoidea C-169 clone FAHX137-B20, complete sequence blastn 21653 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;