RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA385396" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385396 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
406767 406767 PRJNA385396_P_NODE_12001_length_263_cov_1.621053_g11909_i0 PRJNA385396 12001 263 1.621053 4.26336939 Fusarium culmorum narnavirus 1 3233852 Viruses Viruses 195 3.77e-45   NTclustered gi|2758772008|gb|PQ000865.1| 3233852 g11909 i0 87.719 0.650190114068441 171 15 64 5 95 262 299 132 MAG: Fusarium culmorum narnavirus 1 isolate AU2 segment RNA2, complete sequence blastn 171 195 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales     Fusarium culmorum narnavirus 1
407051 407051 PRJNA385396_P_NODE_3161_length_431_cov_1.636872_g3069_i0 PRJNA385396 3161 431 1.636872 7.05491832 Fusarium culmorum narnavirus 1 3233852 Viruses Viruses 279 1.7500000000000002e-70   NTclustered gi|2758772008|gb|PQ000865.1| 3233852 g3069 i0 80.429 0.865429234338747 373 67 86 6 1 370 504 873 MAG: Fusarium culmorum narnavirus 1 isolate AU2 segment RNA2, complete sequence blastn 373 279 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales     Fusarium culmorum narnavirus 1
4234211 4234211 PRJNA385396_P_NODE_5764_length_347_cov_1.000000_g5672_i0 PRJNA385396 5764 347 1 3.47 Hebei narnavirus 1 3372924 Viruses Viruses 558 1.59e-154   NTclustered gi|2820295750|gb|PQ180989.1| 3372924 g5672 i0 95.677 1.87319884726225 347 15 100 0 1 347 881 1227 MAG: Hebei narnavirus 1 isolate Hebei_128 genomic sequence blastn 650 558 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Hebei narnavirus 1
10610971 10610971 PRJNA385396_P_NODE_7869_length_312_cov_1.288703_g7777_i0 PRJNA385396 7869 312 1.288703 4.02075336 Hebei narnavirus 1 3372924 Viruses Viruses 549 8.489999999999997e-152   NTclustered gi|2820295750|gb|PQ180989.1| 3372924 g7777 i0 98.397 3.00641025641026 312 5 100 0 1 312 2398 2709 MAG: Hebei narnavirus 1 isolate Hebei_128 genomic sequence blastn 938 549 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Hebei narnavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;