contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA385396" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2351910 | 2351910 | PRJNA385396_P_NODE_14862_length_249_cov_1.312500_g14770_i0 | PRJNA385396 | 14862 | 249 | 1.3125 | 3.268125 | Isosphaera | 127 | Bacteria | Bacteria | 372 | 1.52e-98 | NTclustered | gi|470487262|ref|NR_076810.1| | 128 | g14770 | i0 | 94.239 | 186.690763052209 | 243 | 14 | 98 | 0 | 1 | 243 | 2429 | 2671 | Isosphaera pallida strain IS1B 23S ribosomal RNA gene, complete sequence | blastn | 46486 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 2957588 | 2957588 | PRJNA385396_P_NODE_17963_length_245_cov_0.895349_g17871_i0 | PRJNA385396 | 17963 | 245 | 0.895349 | 2.19360505 | Phycisphaeraceae bacterium D3-23 | 3004190 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2727577647|gb|CP114179.1| | 3004190 | g17871 | i0 | 100 | 0.114285714285714 | 28 | 0 | 11 | 0 | 22 | 49 | 949644 | 949617 | Phycisphaeraceae bacterium D3-23 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium D3-23 | ||
| 6784546 | 6784546 | PRJNA385396_P_NODE_16186_length_248_cov_0.880000_g16094_i0 | PRJNA385396 | 16186 | 248 | 0.88 | 2.1824 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 316 | 7.2e-82 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g16094 | i0 | 89.879 | 65.4879032258064 | 247 | 24 | 99 | 1 | 2 | 248 | 2018474 | 2018229 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 16241 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 15709898 | 15709898 | PRJNA385396_P_NODE_7193_length_322_cov_1.236948_g7101_i0 | PRJNA385396 | 7193 | 322 | 1.236948 | 3.98297256 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 379 | 1.22e-100 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g7101 | i0 | 88.199 | 125.953416149068 | 322 | 33 | 99 | 5 | 2 | 322 | 4317515 | 4317198 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 40557 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 24633616 | 24633616 | PRJNA385396_P_NODE_8860_length_299_cov_1.057522_g8768_i0 | PRJNA385396 | 8860 | 299 | 1.057522 | 3.16199078 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 392 | 1.44e-104 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g8768 | i0 | 90.301 | 43.752508361204 | 299 | 29 | 100 | 0 | 1 | 299 | 2666501 | 2666799 | Gemmata sp. SH-PL17, complete genome | blastn | 13082 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;