contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA385073" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 406108 | 406108 | PRJNA385073_P_NODE_42881_length_250_cov_1.446328_g42719_i0 | PRJNA385073 | 42881 | 250 | 1.446328 | 3.61582 | Opitutaceae bacterium TAV5 | 794903 | Bacteria | Bacteria | 97.1 | 1.03e-15 | NTclustered | gi|573471959|gb|CP007053.1| | 794903 | g42719 | i0 | 86.022 | 1.116 | 93 | 10 | 37 | 3 | 100 | 191 | 7252435 | 7252345 | Opitutaceae bacterium TAV5, complete genome | blastn | 279 | 97.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium TAV5 | ||
| 406121 | 406121 | PRJNA385073_P_NODE_43561_length_250_cov_0.870056_g43399_i0 | PRJNA385073 | 43561 | 250 | 0.870056 | 2.17514 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 355 | 1.54e-93 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g43399 | i0 | 92.4 | 77.032 | 250 | 17 | 100 | 1 | 1 | 250 | 1953 | 2200 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 19258 | 355 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 5509782 | 5509782 | PRJNA385073_P_NODE_4045_length_582_cov_1.489194_g3889_i0 | PRJNA385073 | 4045 | 582 | 1.489194 | 8.66710908 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1048 | 0 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g3889 | i0 | 99.141 | 95.2285223367698 | 582 | 5 | 100 | 0 | 1 | 582 | 737394 | 736813 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 55423 | 1048 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15708417 | 15708417 | PRJNA385073_P_NODE_23313_length_302_cov_3.026201_g23151_i0 | PRJNA385073 | 23313 | 302 | 3.026201 | 9.13912702 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 117 | 9.83e-22 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g23151 | i0 | 78.977 | 0.582781456953642 | 176 | 34 | 58 | 3 | 1 | 176 | 5027136 | 5027308 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 176 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 15708979 | 15708979 | PRJNA385073_P_NODE_49513_length_246_cov_1.410405_g49351_i0 | PRJNA385073 | 49513 | 246 | 1.410405 | 3.4695963 | uncultured Verrucomicrobiales bacterium | 100234 | Bacteria | Bacteria | 263 | 9.430000000000001e-66 | NTclustered | gi|192805056|emb|FM175858.1| | 100234 | g49351 | i0 | 94.186 | 70.4024390243902 | 172 | 10 | 70 | 0 | 74 | 245 | 1 | 172 | Uncultured Verrucomicrobiales bacterium partial 16S rRNA gene, clone CL3.D142 | blastn | 17319 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | uncultured Verrucomicrobiales bacterium | |||
| 16983871 | 16983871 | PRJNA385073_P_NODE_60874_length_234_cov_4.136646_g60712_i0 | PRJNA385073 | 60874 | 234 | 4.136646 | 9.67975164 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 372 | 1.42e-98 | NTclustered | gi|226525317|gb|FJ872374.1| | 156588 | g60712 | i0 | 97.285 | 268.264957264957 | 221 | 3 | 94 | 3 | 15 | 234 | 3077 | 2859 | Uncultured Verrucomicrobia bacterium clone 184 genomic sequence | blastn | 62774 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 17653919 | 17653919 | PRJNA385073_P_NODE_48214_length_247_cov_0.885057_g48052_i0 | PRJNA385073 | 48214 | 247 | 0.885057 | 2.18609079 | Bacteria | 2 | Bacteria | Bacteria | 257 | 4.41e-64 | NTclustered | gi|2076416356|gb|CP076040.1| | 2684114 | g48052 | i0 | 85.484 | 88.2550607287449 | 248 | 34 | 99 | 2 | 1 | 246 | 4362819 | 4362572 | Opitutia bacterium ISCC 52 isolate E3 chromosome, complete genome | blastn | 21799 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium ISCC 52 | ||||
| 20807556 | 20807556 | PRJNA385073_P_NODE_36117_length_263_cov_1.115789_g35955_i0 | PRJNA385073 | 36117 | 263 | 1.115789 | 2.93452507 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 268 | 2.1899999999999998e-67 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g35955 | i0 | 85.496 | 0.996197718631179 | 262 | 33 | 99 | 5 | 4 | 263 | 1624604 | 1624346 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 262 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 23358289 | 23358289 | PRJNA385073_P_NODE_48879_length_247_cov_0.885057_g48717_i0 | PRJNA385073 | 48879 | 247 | 0.885057 | 2.18609079 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 435 | 1.9e-117 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g48717 | i0 | 98.381 | 88.2834008097166 | 247 | 4 | 100 | 0 | 1 | 247 | 15867 | 15621 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 21806 | 435 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;