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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA385073" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1680679 1680679 PRJNA385073_P_NODE_29902_length_279_cov_1.888350_g29740_i0 PRJNA385073 29902 279 1.88835 5.2684965 Methanomassiliicoccaceae archaeon 2052168 Archaea Archaea 455 1.68e-123   NTclustered gi|2621703346|emb|OY760646.1| 2052168 g29740 i0 96.057 1.36559139784946 279 11 100 0 1 279 447915 447637 MAG: Methanomassiliicoccaceae archaeon isolate 2dded12f-1c8b-4e4a-b374-f87b1937d54c genome assembly, chromosome: 1 blastn 381 455 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon
4233349 4233349 PRJNA385073_P_NODE_49484_length_246_cov_1.531792_g49322_i0 PRJNA385073 49484 246 1.531792 3.76820832 Methanomassiliicoccaceae archaeon 2052168 Archaea Archaea 263 9.430000000000001e-66   NTclustered gi|2621703346|emb|OY760646.1| 2052168 g49322 i0 86.235 2.60569105691057 247 29 99 5 3 246 447656 447900 MAG: Methanomassiliicoccaceae archaeon isolate 2dded12f-1c8b-4e4a-b374-f87b1937d54c genome assembly, chromosome: 1 blastn 641 263 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon
18257630 18257630 PRJNA385073_P_NODE_41835_length_251_cov_0.865169_g41673_i0 PRJNA385073 41835 251 0.865169 2.17157419 uncultured Methanomassiliicoccales archaeon 1235852 Archaea Archaea 267 7.459999999999999e-67   NTclustered gi|2874253643|emb|OY968769.1| 1235852 g41673 i0 86.166 2.96414342629482 253 27 99 6 1 250 62691 62938 MAG: uncultured Methanomassiliicoccales archaeon isolate MFD00905.bin.2.112 genome assembly, chromosome: 1 blastn 744 267 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     uncultured Methanomassiliicoccales archaeon
22753125 22753125 PRJNA385073_P_NODE_39018_length_256_cov_1.524590_g38856_i0 PRJNA385073 39018 256 1.52459 3.9029504 Candidatus Methanogranum 1577789 Archaea Archaea 217 7.8e-52   NTclustered gi|2621784480|emb|OY780938.1| 2093355 g38856 i0 82.031 3 256 45 100 1 1 256 1493228 1493482 MAG: uncultured Candidatus Methanogranum sp. isolate 9d90576e-3f35-4afd-8682-ecdb60e67c32 genome assembly, chromosome: 1 blastn 768 217 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Candidatus Methanogranum uncultured Candidatus Methanogranum sp.
23357762 23357762 PRJNA385073_P_NODE_24399_length_297_cov_1.370536_g24237_i0 PRJNA385073 24399 297 1.370536 4.07049192 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 383 8.61e-102   NTclustered gi|1870051182|gb|CP058896.1| 1906667 g24237 i0 89.899 59.8148148148148 297 30 100 0 1 297 1627396 1627692 MAG: Methanomassiliicoccales archaeon isolate Ch47 chromosome blastn 17765 383 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
23358372 23358372 PRJNA385073_P_NODE_5259_length_524_cov_3.545455_g5100_i0 PRJNA385073 5259 524 3.545455 18.5781842 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 616 1.4499999999999995e-171   NTclustered gi|1870051182|gb|CP058896.1| 1906667 g5100 i0 88.123 15.7958015267176 522 57 99 4 6 524 1629228 1629747 MAG: Methanomassiliicoccales archaeon isolate Ch47 chromosome blastn 8277 616 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;