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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA385073" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA385073 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1680674 1680674 PRJNA385073_P_NODE_29642_length_280_cov_1.483092_g29480_i0 PRJNA385073 29642 280 1.483092 4.1526576 Saccostrea echinata 191078 Mollusca Mollusca 200 8.71e-47   NTclustered gi|2628601743|ref|XM_061310664.1| 191078 g29480 i0 81.857 14.2392857142857 237 43 85 0 2 238 154 390 PREDICTED: Saccostrea echinata ubiquitin-conjugating enzyme E2 L3-like (LOC133175546), mRNA blastn 3987 200 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
1681017 1681017 PRJNA385073_P_NODE_46182_length_248_cov_1.520000_g46020_i0 PRJNA385073 46182 248 1.52 3.7696 Dreissena polymorpha 45954 Mollusca Mollusca 121 6.059999999999999e-23   NTclustered gi|2364551514|ref|XM_052378024.1| 45954 g46020 i0 82.143 24.2217741935484 140 25 56 0 109 248 161 300 PREDICTED: Dreissena polymorpha small nuclear ribonucleoprotein-associated protein B-like (LOC127846588), transcript variant X1, mRNA blastn 6007 121 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
2956694 2956694 PRJNA385073_P_NODE_37563_length_259_cov_2.897849_g37401_i0 PRJNA385073 37563 259 2.897849 7.50542891 Ruditapes philippinarum 129788 Mollusca Mollusca 479 9.13e-131   NTclustered gi|2041092930|gb|MZ227553.1| 129788 g37401 i0 100 100.440154440154 259 0 100 0 1 259 2199 2457 Ruditapes philippinarum isolate RP01 large subunit ribosomal RNA gene, partial sequence blastn 26014 479 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
5509280 5509280 PRJNA385073_P_NODE_19245_length_323_cov_1.500000_g19083_i0 PRJNA385073 19245 323 1.5 4.845 Littorina saxatilis 31220 Mollusca Mollusca 62.1 5.04e-5   NTclustered gi|2868666721|ref|XM_070333157.1| 31220 g19083 i0 94.872 0.476780185758514 39 2 12 0 5 43 719 757 PREDICTED: Littorina saxatilis pre-mRNA-splicing factor SYF2-like (LOC138961503), mRNA blastn 154 62.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
6179500 6179500 PRJNA385073_P_NODE_905_length_1075_cov_3.576846_g809_i0 PRJNA385073 905 1075 3.576846 38.4510945 Metazoa 33208 Mollusca Mollusca 231 1.3099999999999995e-55   NTclustered gi|2160905750|ref|XM_045316417.1| 6596 g809 i0 83.071 12.4009302325581 254 43 24 0 678 931 418 165 PREDICTED: Mercenaria mercenaria dynein light chain 1, cytoplasmic (LOC123534250), mRNA blastn 13331 231 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
8728825 8728825 PRJNA385073_P_NODE_28067_length_284_cov_2.175355_g27905_i0 PRJNA385073 28067 284 2.175355 6.1780082 Metazoa 33208 Mollusca Mollusca 525 1.2899999999999994e-144   NTclustered gi|1928112764|gb|MT947788.1| 6523 g27905 i0 100 100 284 0 100 0 1 284 1531 1248 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 28400 525 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
11884245 11884245 PRJNA385073_P_NODE_1810_length_809_cov_1.698370_g1682_i0 PRJNA385073 1810 809 1.69837 13.7398133 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.023   NTclustered gi|2912991694|dbj|AP039596.1| 145626 g1682 i0 96.875 0.0395550061804697 32 1 4 0 665 696 32341961 32341992 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 15, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
15708396 15708396 PRJNA385073_P_NODE_22553_length_306_cov_220.845494_g22391_i0 PRJNA385073 22553 306 220.845494 675.78721164 Mytilus trossulus 6551 Mollusca Mollusca 126 1.66e-24   NTclustered gi|2693923036|ref|XR_010102525.1| 6551 g22391 i0 93.103 15.5359477124183 87 5 28 1 136 221 154 68 PREDICTED: Mytilus trossulus uncharacterized LOC134693934 (LOC134693934), ncRNA blastn 4754 126 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus trossulus
16379007 16379007 PRJNA385073_P_NODE_9793_length_410_cov_2.507418_g9632_i0 PRJNA385073 9793 410 2.507418 10.2804138 Metazoa 33208 Mollusca Mollusca 758 0   NTclustered gi|1928112764|gb|MT947788.1| 6523 g9632 i0 100 99.6536585365854 410 0 100 0 1 410 499 90 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 40858 758 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
19531389 19531389 PRJNA385073_P_NODE_1676_length_833_cov_2.618421_g1551_i0 PRJNA385073 1676 833 2.618421 21.81144693 Haliotis rubra 36100 Mollusca Mollusca 355 5.7e-93   NTclustered gi|2194127963|ref|XM_046720016.1| 36100 g1551 i0 82.353 19.2977190876351 408 72 49 0 3 410 232 639 PREDICTED: Haliotis rubra S-phase kinase-associated protein 1 (LOC124283966), mRNA blastn 16075 355 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
23357831 23357831 PRJNA385073_P_NODE_28039_length_284_cov_2.530806_g27877_i0 PRJNA385073 28039 284 2.530806 7.18748904 Bradybaena similaris 145626 Mollusca Mollusca 158 5.4e-34   NTclustered gi|2912986657|dbj|AP039591.1| 145626 g27877 i0 77.241 6.08450704225352 290 52 100 11 1 284 47027850 47028131 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 10, sequence blastn 1728 158 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;