RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA385073" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 22 ✖

bioproject 1

  • PRJNA385073 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1681332 1681332 PRJNA385073_P_NODE_61862_length_230_cov_2.821656_g61700_i0 PRJNA385073 61862 230 2.821656 6.4898088 Tolivirales sp. 2809914 Viruses Viruses 279 8.65e-71   NTclustered gi|2647550049|gb|OR843807.1| 2809914 g61700 i0 95.93 1.52173913043478 172 7 75 0 1 172 1985 2156 Tolivirales sp. strain MR233-17E/8198 RNA-dependent RNA polymerase and hypothetical protein genes, partial cds blastn 350 279 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
2957358 2957358 PRJNA385073_P_NODE_9923_length_408_cov_2.202985_g9762_i0 PRJNA385073 9923 408 2.202985 8.9881788 Beijing sediment noda-like virus 3 2824385 Viruses Viruses 137 1.05e-27   NTclustered gi|2075443876|gb|MW897069.1| 2824385 g9762 i0 85.606 0.323529411764706 132 17 32 2 220 349 3476 3345 MAG: Beijing sediment noda-like virus 3 isolate 165-k141_17508 hypothetical protein gene, complete cds blastn 132 137 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Beijing sediment noda-like virus 3
4232905 4232905 PRJNA385073_P_NODE_27644_length_286_cov_0.981221_g27482_i0 PRJNA385073 27644 286 0.981221 2.80629206 Tobamovirus tabaci 3432891 Viruses Viruses 512 1.01e-140   NTclustered gi|388240233|emb|HE818437.1| 12242 g27482 i0 98.951 99.9965034965035 286 3 100 0 1 286 3494 3209 Tobacco mosaic virus isolate Mangshi-2, complete genome blastn 28599 512 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
6784362 6784362 PRJNA385073_P_NODE_9306_length_418_cov_1.130435_g9145_i0 PRJNA385073 9306 418 1.130435 4.7252183 Andihavirus borborohabitans 2843692 Viruses Viruses 211 6.27e-50   NTclustered gi|2497515024|ref|NC_074146.1| 2786658 g9145 i0 87.166 0.447368421052632 187 23 45 1 92 278 1 186 SsRNA phage SRR7976300_9 genomic sequence blastn 187 211 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Solspiviridae Andihavirus Andihavirus borborohabitans
8059468 8059468 PRJNA385073_P_NODE_46667_length_248_cov_0.880000_g46505_i0 PRJNA385073 46667 248 0.88 2.1824 Polerovirus TUYV 3431793 Viruses Viruses 448 2.4499999999999996e-121   NTclustered gi|336444814|gb|JN015068.1| 1046403 g46505 i0 99.194 99.7943548387097 248 2 100 0 1 248 2384 2137 Brassica yellows virus, complete genome blastn 24749 448 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Polerovirus Polerovirus TUYV
8059596 8059596 PRJNA385073_P_NODE_53347_length_244_cov_0.900585_g53185_i0 PRJNA385073 53347 244 0.900585 2.1974274 Gammacarmovirus melonis 3048200 Viruses Viruses 429 8.699999999999998e-116   NTclustered gi|1695685772|gb|MK604924.1| 11987 g53185 i0 98.361 36.7786885245902 244 4 100 0 1 244 1824 2067 Melon necrotic spot virus isolate 3948, complete genome blastn 8974 429 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Gammacarmovirus Gammacarmovirus melonis
11279229 11279229 PRJNA385073_P_NODE_19149_length_324_cov_0.920319_g18987_i0 PRJNA385073 19149 324 0.920319 2.98183356 Tobamovirus 12234 Viruses Viruses 584 2.429999999999999e-162   NTclustered gi|20177424|ref|NC_003630.1| 12239 g18987 i0 99.381 94.4320987654321 323 1 99 1 2 324 4056 3735 Pepper mild mottle virus, complete genome blastn 30596 584 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
11884162 11884162 PRJNA385073_P_NODE_14030_length_360_cov_1.898955_g13869_i0 PRJNA385073 14030 360 1.898955 6.836238 Chrocajirk virus 3129534 Viruses Viruses 191 6.93e-44   NTclustered gi|2717317823|gb|PP171982.1| 3129534 g13869 i0 100 36.25 103 0 29 0 1 103 14 116 MAG: Chrocajirk virus isolate CC1C_k141_100002 genomic sequence blastn 13050 191 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Chrocajirk virus
11884955 11884955 PRJNA385073_P_NODE_4950_length_537_cov_17.081897_g4792_i0 PRJNA385073 4950 537 17.081897 91.72978689 Bahdevuvirus caenivivens 2843795 Viruses Viruses 342 2.8e-89   NTclustered gi|2497513288|ref|NC_073766.1| 2786400 g4792 i0 94.954 0.899441340782123 218 11 41 0 320 537 241 24 SsRNA phage SRR5466365_1 genomic sequence blastn 483 342 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Atkinsviridae Bahdevuvirus Bahdevuvirus caenivivens
16983040 16983040 PRJNA385073_P_NODE_22114_length_309_cov_1.305085_g21952_i0 PRJNA385073 22114 309 1.305085 4.03271265 Tobamovirus tabaci 3432891 Viruses Viruses 571 1.7899999999999995e-158   NTclustered gi|388240233|emb|HE818437.1| 12242 g21952 i0 100 100 309 0 100 0 1 309 3916 4224 Tobacco mosaic virus isolate Mangshi-2, complete genome blastn 30900 571 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
16983503 16983503 PRJNA385073_P_NODE_4254_length_570_cov_1.068410_g4098_i0 PRJNA385073 4254 570 1.06841 6.089937 Tobamovirus tabaci 3432891 Viruses Viruses 1053 0   NTclustered gi|348605458|gb|JF920727.1| 12242 g4098 i0 100 99.978947368421 570 0 100 0 1 570 5193 5762 Tobacco mosaic virus isolate Shanxi, complete genome blastn 56988 1053 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
18257756 18257756 PRJNA385073_P_NODE_49055_length_247_cov_0.885057_g48893_i0 PRJNA385073 49055 247 0.885057 2.18609079 Lentinula edodes deltaflexivirus 2 2778980 Viruses Viruses 329 9.21e-86   NTclustered gi|1928162793|gb|MN744724.1| 2778980 g48893 i0 90.688 1 247 23 100 0 1 247 4653 4407 Lentinula edodes deltaflexivirus 2 isolate Le10WIL RNA-dependent RNA polymerase gene, partial cds; and hypothetical protein gene, complete cds blastn 247 329 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Lentinula edodes deltaflexivirus 2
18258060 18258060 PRJNA385073_P_NODE_63295_length_221_cov_5.560811_g63133_i0 PRJNA385073 63295 221 5.560811 12.28939231 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 359 1.03e-94   NTclustered gi|2324991072|gb|OK636212.1| 2992848 g63133 i0 95.928 1 221 9 100 0 1 221 4982 5202 Lentinula eaodes hypovirus 2 isolate LED2-8 RNA-dependent RNA polymerase (RdRp) gene, complete cds blastn 221 359 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
18927627 18927627 PRJNA385073_P_NODE_27155_length_287_cov_1.439252_g26993_i0 PRJNA385073 27155 287 1.439252 4.13065324 Tobamovirus 12234 Viruses Viruses 531 2.799999999999999e-146   NTclustered gi|2327914667|gb|OM366242.1| 12242 g26993 i0 100 99.9581881533101 287 0 100 0 1 287 114 400 Tobacco mosaic virus isolate Yunnanwenshan replicase protein gene, complete cds blastn 28688 531 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
19531654 19531654 PRJNA385073_P_NODE_28716_length_282_cov_2.894737_g28554_i0 PRJNA385073 28716 282 2.894737 8.16315834 Chrocagosk virus 3129397 Viruses Viruses 63.9 1.2e-5   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g28554 i0 97.297 0.131205673758865 37 1 13 0 48 84 517 553 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 37 63.9 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
20807085 20807085 PRJNA385073_P_NODE_15757_length_346_cov_1.875458_g15596_i0 PRJNA385073 15757 346 1.875458 6.48908468 Timirovirus borboradaptatum 2846450 Viruses Viruses 501 2.71e-137   NTclustered gi|2497516585|ref|NC_074508.1| 2786465 g15596 i0 93.003 0.991329479768786 343 24 99 0 1 343 1938 2280 SsRNA phage SRR5467091_15 genomic sequence blastn 343 501 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Steitzviridae Timirovirus Timirovirus borboradaptatum
20807430 20807430 PRJNA385073_P_NODE_31277_length_275_cov_2.029703_g31115_i0 PRJNA385073 31277 275 2.029703 5.58168325 Divavirus alphadiuris 3428303 Viruses Viruses 65.8 3.25e-6   NTclustered gi|410428375|ref|NC_019029.1| 1247115 g31115 i0 91.489 0.341818181818182 47 4 17 0 229 275 6769 6815 Diuris virus A isolate SW3.3, complete genome blastn 94 65.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Divavirus Divavirus alphadiuris
22082517 22082517 PRJNA385073_P_NODE_41758_length_251_cov_0.865169_g41596_i0 PRJNA385073 41758 251 0.865169 2.17157419 Ripachij virus 3130407 Viruses Viruses 267 7.459999999999999e-67   NTclustered gi|2717319663|gb|PP172709.1| 3130407 g41596 i0 85.827 169.741035856574 254 32 100 4 1 251 684 432 MAG: Ripachij virus isolate KCAP1_k141_392510 genomic sequence blastn 42605 267 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripachij virus
22082608 22082608 PRJNA385073_P_NODE_46198_length_248_cov_1.451429_g46036_i0 PRJNA385073 46198 248 1.451429 3.59954392 Ripaflec virus 3130560 Viruses Viruses 313 9.32e-81   NTclustered gi|2717320098|gb|PP172862.1| 3130560 g46036 i0 91.304 120.487903225806 230 18 92 2 20 248 5456 5684 MAG: Ripaflec virus isolate KCAP2_k141_128097 genomic sequence blastn 29881 313 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaflec virus
23358480 23358480 PRJNA385073_P_NODE_5779_length_506_cov_7.988453_g5619_i0 PRJNA385073 5779 506 7.988453 40.42157218 Bahdevuvirus caenivivens 2843795 Viruses Viruses 326 2.64e-84   NTclustered gi|2497513288|ref|NC_073766.1| 2786400 g5619 i0 93.578 0.954545454545455 218 14 43 0 289 506 241 24 SsRNA phage SRR5466365_1 genomic sequence blastn 483 326 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Atkinsviridae Bahdevuvirus Bahdevuvirus caenivivens
24631944 24631944 PRJNA385073_P_NODE_17860_length_331_cov_3.852713_g17698_i0 PRJNA385073 17860 331 3.852713 12.75248003 Bahdevuvirus caenivivens 2843795 Viruses Viruses 292 1.6899999999999999e-74   NTclustered gi|2497513288|ref|NC_073766.1| 2786400 g17698 i0 91.163 0.649546827794562 215 19 65 0 117 331 241 27 SsRNA phage SRR5466365_1 genomic sequence blastn 215 292 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Atkinsviridae Bahdevuvirus Bahdevuvirus caenivivens
24632343 24632343 PRJNA385073_P_NODE_34340_length_267_cov_1.829897_g34178_i0 PRJNA385073 34340 267 1.829897 4.88582499 Sichuan mamastrovirus 11 2933222 Viruses Viruses 215 2.94e-51   NTclustered gi|2203408192|gb|MW784105.1| 2933222 g34178 i0 86.911 31.1647940074906 191 25 72 0 77 267 194 4 MAG: Sichuan mamastrovirus 11 isolate R69-151373, complete genome blastn 8321 215 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae Mamastrovirus Sichuan mamastrovirus 11

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;