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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA385064" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA385064 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405384 405384 PRJNA385064_P_NODE_621_length_647_cov_6.212375_g511_i0 PRJNA385064 621 647 6.212375 40.19406625 Brachionus manjavacas 667381 Rotifera other_Eukaryota 922 0   NTclustered gi|2006240371|gb|MW559986.1| 667381 g511 i0 92.438 61.7403400309119 648 46 100 3 1 647 10023 10668 Brachionus manjavacas isolate AU chromosome I mitochondrion, complete sequence blastn 39946 922 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus manjavacas
405385 405385 PRJNA385064_P_NODE_6461_length_167_cov_1.305085_g6336_i0 PRJNA385064 6461 167 1.305085 2.17949195 Philodina roseola 96448 Rotifera other_Eukaryota 180 6.16e-41   NTclustered gi|183178949|gb|EU432548.1| 96448 g6336 i0 86.145 1.98802395209581 166 23 99 0 2 167 39712 39547 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 332 180 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
9333432 9333432 PRJNA385064_P_NODE_1548_length_379_cov_1.975758_g1423_i0 PRJNA385064 1548 379 1.975758 7.48812282 Brachionus plicatilis 10195 Rotifera other_Eukaryota 339 2.4799999999999997e-88   NTclustered gi|307640110|gb|GQ894769.1| 10195 g1423 i0 82.94 5.60422163588391 381 59 100 6 1 379 671 1047 Brachionus plicatilis isolate Bsal45 ATPase F0 subunit 6 (atp6) gene, partial cds; tRNA-Asp gene, complete sequence; and large ribosomal RNA subunit (rrnL) gene, partial sequence; mitochondrial blastn 2124 339 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
10609170 10609170 PRJNA385064_P_NODE_5729_length_178_cov_1.186047_g5604_i0 PRJNA385064 5729 178 1.186047 2.11116366 Adineta vaga 104782 Rotifera other_Eukaryota 267 4.94e-67   NTclustered gi|189313895|gb|EU637017.1| 104782 g5604 i0 95.238 14.876404494382 168 8 94 0 11 178 34854 34687 Adineta vaga glycoprotein gene, partial cds; and hypothetical proteins, DUF288 containing protein, hypothetical protein, methionine sulfoxide reductase, strabismus, S/T/Y kinase, integral membrane protein, plasma membrane calcium ATPase, myosin alkali light chain, hypothetical protein, hsp82, hypothetical protein, DUF288 containing protein, hypothetical protein, saicars, IBR containing protein, hypothetical proteins, NHL repeat containing protein, ubiquitin ligase, snf7, C2 containing protein, PKD channel, synaptotagmin, and hypothetical protein genes, complete cds blastn 2648 267 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14434098 14434098 PRJNA385064_P_NODE_6732_length_166_cov_1.307692_g6607_i0 PRJNA385064 6732 166 1.307692 2.17076872 Adineta ricciae 249248 Rotifera other_Eukaryota 296 5.82e-76   NTclustered gi|62362195|gb|AY942837.1| 249248 g6607 i0 98.795 1 166 2 100 0 1 166 337 172 Adineta ricciae ribosomal protein S7-like protein mRNA, complete cds blastn 166 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
15708111 15708111 PRJNA385064_P_NODE_4533_length_202_cov_0.973856_g4408_i0 PRJNA385064 4533 202 0.973856 1.96718912 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 230 7.569999999999998e-56   NTclustered gi|402761761|gb|JX184012.1| 104788 g4408 i0 87.129 9.67326732673267 202 26 100 0 1 202 565 364 Macrotrachela quadricornifera isolate CR cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 1954 230 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
16982750 16982750 PRJNA385064_P_NODE_5714_length_178_cov_1.581395_g5589_i0 PRJNA385064 5714 178 1.581395 2.8148831 Adineta oculata 338306 Rotifera other_Eukaryota 322 1.04e-83   NTclustered gi|71840136|gb|DQ078515.1| 338306 g5589 i0 99.435 98.376404494382 177 1 99 0 2 178 438 262 Adineta oculata clone War1.1 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial blastn 17511 322 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta oculata
22081808 22081808 PRJNA385064_P_NODE_4138_length_213_cov_1.371951_g4013_i0 PRJNA385064 4138 213 1.371951 2.92225563 Adineta vaga 104782 Rotifera other_Eukaryota 211 2.92e-50   NTclustered gi|187233665|gb|EU643499.1| 104782 g4013 i0 94.203 0.647887323943662 138 8 65 0 76 213 447 310 Adineta vaga ribosomal protein L26 mRNA, partial cds blastn 138 211 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22081826 22081826 PRJNA385064_P_NODE_698_length_609_cov_3.800000_g583_i0 PRJNA385064 698 609 3.8 23.142 Philodina citrina 468664 Rotifera other_Eukaryota 660 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g583 i0 87.986 22.1822660098522 566 59 92 8 22 584 1834 2393 Philodina citrina complete mitochondrial genome blastn 13509 660 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;