RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA385064" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA385064 · 26 ✖

analysis 1

  • blastn · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1075846 1075846 PRJNA385064_P_NODE_6121_length_171_cov_1.696721_g5996_i0 PRJNA385064 6121 171 1.696721 2.90139291 Malassezia 55193 Fungi Fungi 316 4.6e-82   NTclustered gi|1101565660|gb|KX839636.1| 55194 g5996 i0 100 100 171 0 100 0 1 171 63 233 Malassezia furfur isolate GDMUZJ2015102 26S ribosomal RNA gene, partial sequence blastn 17100 316 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
2351284 2351284 PRJNA385064_P_NODE_6202_length_170_cov_1.710744_g6077_i0 PRJNA385064 6202 170 1.710744 2.9082648 Basidiomycota 5204 Fungi Fungi 315 1.64e-81   NTclustered gi|2843563557|gb|PQ549570.1| 40563 g6077 i0 100 100 170 0 100 0 1 170 379 548 Sporobolomyces roseus strain CCY 19-6-25 large subunit ribosomal RNA gene, partial sequence blastn 17000 315 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces roseus
2351288 2351288 PRJNA385064_P_NODE_6682_length_166_cov_5.478632_g6557_i0 PRJNA385064 6682 166 5.478632 9.09452912 Microbotryomycetes 162481 Fungi Fungi 307 2.69e-79   NTclustered gi|8096249|dbj|AB021694.1| 5003 g6557 i0 100 100.012048192771 166 0 100 0 1 166 1256 1421 Sporidiobolus pararoseus gene for 18S ribosomal RNA, partial sequence blastn 16602 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces pararoseus
2956063 2956063 PRJNA385064_P_NODE_7103_length_165_cov_0.879310_g6978_i0 PRJNA385064 7103 165 0.87931 1.4508615 Malassezia restricta 76775 Fungi Fungi 305 9.59e-79   NTclustered gi|1546631293|ref|XM_027627307.1| 76775 g6978 i0 100 1 165 0 100 0 1 165 623 459 Malassezia restricta ATP-dependent RNA helicase DDX54/DBP10 (MRET_0680), partial mRNA blastn 165 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5509091 5509091 PRJNA385064_P_NODE_7265_length_164_cov_0.886957_g7140_i0 PRJNA385064 7265 164 0.886957 1.45460948 Flammulina filiformis 2060913 Fungi Fungi 287 3.45e-73   NTclustered gi|2831325251|gb|PQ279421.1| 2060913 g7140 i0 98.171 1 164 3 100 0 1 164 501 338 Flammulina filiformis strain 6-3 C2H2 transcription factor ZFP20 mRNA, complete cds blastn 164 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Flammulina Flammulina filiformis
6783052 6783052 PRJNA385064_P_NODE_1906_length_335_cov_3.027972_g1781_i0 PRJNA385064 1906 335 3.027972 10.1437062 Leucosporidium sp. AY30 662878 Fungi Fungi 420 7.52e-113   NTclustered gi|254927417|gb|GQ336996.1| 662878 g1781 i0 89.443 77.3582089552239 341 25 99 8 2 335 5806 5470 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 25915 420 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
6783061 6783061 PRJNA385064_P_NODE_4926_length_193_cov_1.270833_g4801_i0 PRJNA385064 4926 193 1.270833 2.45270769 Tilletia olida 315511 Fungi Fungi 351 1.46e-92   NTclustered gi|501438074|gb|FJ644527.2| 315511 g4801 i0 100 147.585492227979 190 0 98 0 1 190 1437 1626 Tilletia olida voucher RB 2063 28S ribosomal RNA gene, partial sequence blastn 28484 351 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia olida
6783064 6783064 PRJNA385064_P_NODE_5786_length_177_cov_1.218750_g5661_i0 PRJNA385064 5786 177 1.21875 2.1571875 Gelatoporia subvermispora 42742 Fungi Fungi 130 6.72e-26   NTclustered gi|480326983|gb|JX507706.1| 42742 g5661 i0 82.432 76.1016949152542 148 26 84 0 1 148 1468 1615 Gelatoporia subvermispora isolate 188 large subunit ribosomal RNA gene, partial sequence blastn 13470 130 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Gelatoporiaceae Gelatoporia Gelatoporia subvermispora
6783078 6783078 PRJNA385064_P_NODE_7586_length_163_cov_0.894737_g7461_i0 PRJNA385064 7586 163 0.894737 1.45842131 Malassezia restricta 76775 Fungi Fungi 302 1.22e-77   NTclustered gi|1546631503|ref|XM_027627412.1| 76775 g7461 i0 100 1.79754601226994 163 0 100 0 1 163 997 835 Malassezia restricta serine/threonine-protein phosphatase 2A activator (MRET_0785), partial mRNA blastn 293 302 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7453879 7453879 PRJNA385064_P_NODE_6586_length_167_cov_0.864407_g6461_i0 PRJNA385064 6586 167 0.864407 1.44355969 Auricularia 5230 Fungi Fungi 231 1.68e-56   NTclustered gi|328684471|gb|JF440698.1| 29893 g6461 i0 91.617 100.131736526946 167 14 100 0 1 167 1 167 Auricularia polytricha strain APFJ 28S ribosomal RNA gene, partial sequence; intergenic spacer 1, complete sequence; and 5S ribosomal RNA gene, partial sequence blastn 16722 231 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Auriculariales Auriculariaceae Auricularia Auricularia polytricha
8058663 8058663 PRJNA385064_P_NODE_5947_length_174_cov_1.608000_g5822_i0 PRJNA385064 5947 174 1.608 2.79792 Lyomyces orarius 3132101 Fungi Fungi 283 4.769999999999999e-72   NTclustered gi|2697399980|gb|PP471822.1| 3132101 g5822 i0 96 101.873563218391 175 6 100 1 1 174 354 528 Lyomyces orarius voucher EYu 190724-1 large subunit ribosomal RNA gene, partial sequence blastn 17726 283 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Corticiales Corticiaceae Lyomyces Lyomyces orarius
11279091 11279091 PRJNA385064_P_NODE_6869_length_166_cov_0.871795_g6744_i0 PRJNA385064 6869 166 0.871795 1.4471797 Cylindrobasidium 139105 Fungi Fungi 307 2.69e-79   NTclustered gi|2043892997|gb|MZ268148.1| 89801 g6744 i0 100 100 166 0 100 0 1 166 779 614 Cylindrobasidium ipidophilum isolate B1478 large subunit ribosomal RNA gene, partial sequence blastn 16600 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Cylindrobasidium Cylindrobasidium ipidophilum
11884036 11884036 PRJNA385064_P_NODE_3830_length_222_cov_1.774566_g3705_i0 PRJNA385064 3830 222 1.774566 3.93953652 Rhodotorula glutinis 5535 Fungi Fungi 285 1.7799999999999998e-72   NTclustered gi|225134685|gb|FJ345357.1| 5535 g3705 i0 95.055 23.6576576576577 182 8 82 1 41 222 3969 3789 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 5252 285 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
12554531 12554531 PRJNA385064_P_NODE_1790_length_347_cov_3.114094_g1665_i0 PRJNA385064 1790 347 3.114094 10.80590618 Sporobolomyces 5429 Fungi Fungi 630 3.319999999999999e-176   NTclustered gi|347856|gb|L22261.1|SOIRG18SA 5002 g1665 i0 99.424 99.9596541786744 347 2 100 0 1 347 12 358 Sporidiobolus johnsonii 18S ribosomal RNA gene, complete sequence blastn 34686 630 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces johnsonii
15708119 15708119 PRJNA385064_P_NODE_7073_length_165_cov_0.879310_g6948_i0 PRJNA385064 7073 165 0.87931 1.4508615 Malassezia restricta 76775 Fungi Fungi 300 4.46e-77   NTclustered gi|1546630657|ref|XM_027626989.1| 76775 g6948 i0 100 10.0848484848485 162 0 98 0 1 162 502 663 Malassezia restricta guanine nucleotide-binding protein subunit beta-2-like 1 protein (MRET_0362), partial mRNA blastn 1664 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
16378382 16378382 PRJNA385064_P_NODE_493_length_733_cov_5.706140_g393_i0 PRJNA385064 493 733 5.70614 41.8260062 Microbotryomycetes 162481 Fungi Fungi 1116 0   NTclustered gi|225134685|gb|FJ345357.1| 5535 g393 i0 94.134 106.903137789905 733 43 100 0 1 733 2840 2108 Rhodotorula glutinis strain ATCC 16726 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 78360 1116 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
16982742 16982742 PRJNA385064_P_NODE_3374_length_238_cov_2.730159_g3249_i0 PRJNA385064 3374 238 2.730159 6.49777842 Malassezia restricta 76775 Fungi Fungi 431 2.349999999999999e-116   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g3249 i0 100 87.0336134453782 233 0 98 0 6 238 3007 3239 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 20714 431 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
16982744 16982744 PRJNA385064_P_NODE_3694_length_226_cov_2.288136_g3569_i0 PRJNA385064 3694 226 2.288136 5.17118736 Leucosporidium scottii 5278 Fungi Fungi 361 2.94e-95   NTclustered gi|1358186634|gb|MH047191.1| 5278 g3569 i0 95.556 92.9115044247788 225 10 99 0 2 226 4088 3864 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20998 361 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
16982752 16982752 PRJNA385064_P_NODE_6494_length_167_cov_0.864407_g6369_i0 PRJNA385064 6494 167 0.864407 1.44355969 Malassezia globosa 76773 Fungi Fungi 298 1.63e-76   NTclustered gi|164660219|ref|XM_001731181.1| 425265 g6369 i0 98.802 1 167 2 100 0 1 167 335 169 Malassezia globosa CBS 7966 uncharacterized protein (MGL_1416), partial mRNA blastn 167 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
16982764 16982764 PRJNA385064_P_NODE_7874_length_162_cov_0.902655_g7749_i0 PRJNA385064 7874 162 0.902655 1.4623011 Malassezia restricta 76775 Fungi Fungi 111 2.19e-20   NTclustered gi|1546632000|ref|XM_027627660.1| 76775 g7749 i0 100 0.37037037037037 60 0 37 0 1 60 60 1 Malassezia restricta NADPH-dependent medium chain alcohol dehydrogenase (MRET_1033), partial mRNA blastn 60 111 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17653478 17653478 PRJNA385064_P_NODE_6354_length_168_cov_2.100840_g6229_i0 PRJNA385064 6354 168 2.10084 3.5294112 Basidiomycota 5204 Fungi Fungi 300 4.56e-77   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6229 i0 98.81 99.8035714285714 168 2 100 0 1 168 1302 1469 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 16767 300 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18927403 18927403 PRJNA385064_P_NODE_2015_length_324_cov_1.120000_g1890_i0 PRJNA385064 2015 324 1.12 3.6288 Malassezia 55193 Fungi Fungi 599 8.67e-167   NTclustered gi|1321659621|gb|KY911094.1| 76775 g1890 i0 100 52.5524691358025 324 0 100 0 1 324 33690 33367 Malassezia restricta mitochondrion, complete genome blastn 17027 599 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18927414 18927414 PRJNA385064_P_NODE_5815_length_176_cov_3.590551_g5690_i0 PRJNA385064 5815 176 3.590551 6.31936976 Microbotryomycetes 162481 Fungi Fungi 303 3.71e-78   NTclustered gi|111283897|gb|DQ832234.1| 40563 g5690 i0 100 99.2102272727273 164 0 93 0 1 164 1239 1402 Sporobolomyces roseus AFTOL-ID 1549 25S large subunit ribosomal RNA gene, partial sequence blastn 17461 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces Sporobolomyces roseus
22081817 22081817 PRJNA385064_P_NODE_5418_length_183_cov_2.962687_g5293_i0 PRJNA385064 5418 183 2.962687 5.42171721 Dioszegia hungarica 4972 Fungi Fungi 283 5.08e-72   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g5293 i0 94.565 148.928961748634 184 9 100 1 1 183 1526 1709 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 27254 283 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
22081821 22081821 PRJNA385064_P_NODE_6578_length_167_cov_0.864407_g6453_i0 PRJNA385064 6578 167 0.864407 1.44355969 Malassezia restricta 76775 Fungi Fungi 309 7.53e-80   NTclustered gi|1546632940|ref|XM_027628130.1| 76775 g6453 i0 100 1 167 0 100 0 1 167 3029 2863 Malassezia restricta sorting nexin (MRET_1503), partial mRNA blastn 167 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23357430 23357430 PRJNA385064_P_NODE_6519_length_167_cov_0.864407_g6394_i0 PRJNA385064 6519 167 0.864407 1.44355969 Malassezia restricta 76775 Fungi Fungi 303 3.5e-78   NTclustered gi|1546634576|ref|XM_027628948.1| 76775 g6394 i0 99.401 1 167 1 100 0 1 167 2008 2174 Malassezia restricta sorting nexin (MRET_2321), partial mRNA blastn 167 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;