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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA384462 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1075792 1075792 PRJNA384462_S_NODE_12761_length_167_cov_1.449153_g12645_i0 PRJNA384462 12761 167 1.449153 2.42008551 Mucor 4830 Fungi Fungi 309 7.53e-80   NTclustered gi|158562442|gb|EU195422.1| 4841 g12645 i0 100 105.56287425149701 167 0 100 0 1 167 285 451 Mucor racemosus strain PTCC 5305 clone PM43 28S ribosomal RNA, partial sequence blastn 17629 309 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
6178839 6178839 PRJNA384462_S_NODE_2465_length_331_cov_4.195035_g2349_i0 PRJNA384462 2465 331 4.195035 13.88556585 Mucor 4830 Fungi Fungi 586 6.91e-163   NTclustered gi|2580278665|gb|OR581588.1| 4841 g2349 i0 99.083 96.3776435045317 327 2 98 1 5 330 605 931 Mucor racemosus culture VKM:F-579 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31901 588 0.996598639455782 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
6783029 6783029 PRJNA384462_S_NODE_4006_length_264_cov_2.390698_g3890_i0 PRJNA384462 4006 264 2.390698 6.31144272 Rhizopus microsporus 58291 Fungi Fungi 228 3.729999999999999e-55   NTclustered gi|1331202661|ref|XM_023606834.1| 1340429 g3890 i0 83.468 51.4659090909091 248 37 93 4 1 246 219 464 Rhizopus microsporus ATCC 52813 ras-domain-containing protein (RHIMIDRAFT_205560), partial mRNA blastn 13587 228 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
9333374 9333374 PRJNA384462_S_NODE_1048_length_506_cov_5.129103_g933_i0 PRJNA384462 1048 506 5.129103 25.95326118 Mycotypha africana 64632 Fungi Fungi 169 4.71e-37   NTclustered gi|2432558806|ref|XM_053083065.1| 64632 g933 i0 80 3.58695652173913 230 44 45 2 219 447 283 55 Mycotypha africana 60S ribosomal protein L44 (BDF20DRAFT_904689), partial mRNA blastn 1815 169 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
13829316 13829316 PRJNA384462_S_NODE_14431_length_163_cov_0.894737_g14315_i0 PRJNA384462 14431 163 0.894737 1.45842131 Mucorales 4827 Fungi Fungi 300 4.39e-77   NTclustered gi|1269031155|ref|NC_036158.1| 4829 g14315 i0 100 63.8588957055215 162 0 99 0 2 163 48446 48285 Absidia glauca strain CBS 101.48 mitochondrion, complete genome blastn 10409 300 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia glauca
13829334 13829334 PRJNA384462_S_NODE_3471_length_280_cov_5.116883_g3355_i0 PRJNA384462 3471 280 5.116883 14.3272724 Fungi 4751 Fungi Fungi 518 2.12e-142   NTclustered gi|1694443677|ref|NG_065498.1| 4841 g3355 i0 100 100.078571428571 280 0 100 0 1 280 76 355 Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material blastn 28022 518 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
15708083 15708083 PRJNA384462_S_NODE_4853_length_243_cov_2.886598_g4737_i0 PRJNA384462 4853 243 2.886598 7.01443314 Mucor racemosus 4841 Fungi Fungi 449 6.65e-122   NTclustered gi|225134681|gb|FJ345353.1| 4841 g4737 i0 100 60.1851851851852 243 0 100 0 1 243 2299 2541 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14625 449 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
18256860 18256860 PRJNA384462_S_NODE_5335_length_233_cov_3.923913_g5219_i0 PRJNA384462 5335 233 3.923913 9.14271729 uncultured Glomeromycotina 241622 Fungi Fungi 106 1.58e-18   NTclustered gi|2863800393|gb|PQ669850.1| 241622 g5219 i0 92 6.28326180257511 75 6 32 0 92 166 878 804 Uncultured Glomeromycotina isolate HbAMF84 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1464 106 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
20806916 20806916 PRJNA384462_S_NODE_16117_length_153_cov_4.048077_g16001_i0 PRJNA384462 16117 153 4.048077 6.19355781 Mucor racemosus 4841 Fungi Fungi 259 6.88e-65   NTclustered gi|225134681|gb|FJ345353.1| 4841 g16001 i0 97.386 11.5032679738562 153 2 100 2 1 153 2169 2319 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1760 259 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
21477502 21477502 PRJNA384462_S_NODE_1177_length_480_cov_3.475638_g1062_i0 PRJNA384462 1177 480 3.475638 16.6830624 Mucor 4830 Fungi Fungi 881 0   NTclustered gi|908373101|gb|JF723685.2| 4841 g1062 i0 99.792 100.008333333333 480 1 100 0 1 480 1098 619 Mucor racemosus strain CBS 115.08 18S ribosomal RNA gene, partial sequence blastn 48004 887 0.993235625704622 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
21477530 21477530 PRJNA384462_S_NODE_16137_length_153_cov_2.865385_g16021_i0 PRJNA384462 16137 153 2.865385 4.38403905 Mucor 4830 Fungi Fungi 281 1.47e-71   NTclustered gi|358001175|gb|JN938898.1| 4841 g16021 i0 100 99.4901960784314 152 0 99 0 2 153 843 692 Mucor racemosus strain DAOM 229663 28S ribosomal RNA (LSU) gene, partial sequence blastn 15222 281 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
22081789 22081789 PRJNA384462_S_NODE_8258_length_197_cov_4.560811_g8142_i0 PRJNA384462 8258 197 4.560811 8.98479767 Mucor racemosus 4841 Fungi Fungi 335 1.5099999999999994e-87   NTclustered gi|168378|gb|M26190.1|MRARRHA 4841 g8142 i0 97.462 34.3350253807107 197 4 100 1 1 197 3596 3401 M.racemosus (Zygomycetes) 25S ribosomal RNA gene blastn 6764 335 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;