RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405353 405353 PRJNA384462_S_NODE_6101_length_221_cov_2.883721_g5985_i0 PRJNA384462 6101 221 2.883721 6.37302341 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 52.8 0.02   NTclustered gi|1624755465|ref|XM_029028661.1| 67003 g5985 i0 100 0.253393665158371 28 0 13 0 163 190 2256 2229 Trypanosoma theileri uncharacterized protein (TM35_000311800), partial mRNA blastn 56 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
6178815 6178815 PRJNA384462_S_NODE_12865_length_167_cov_0.864407_g12749_i0 PRJNA384462 12865 167 0.864407 1.44355969 Leishmania 5658 Euglenozoa other_Eukaryota 121 3.789999999999999e-23   NTclustered gi|2593261525|emb|OY748520.1| 5660 g12749 i0 85.841 36.3952095808383 113 16 73 0 55 167 1440775 1440887 Leishmania braziliensis isolate MHOM/BR/75/M2903 genome assembly, chromosome: 34 blastn 6078 121 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
8058594 8058594 PRJNA384462_S_NODE_10047_length_183_cov_1.679104_g9931_i0 PRJNA384462 10047 183 1.679104 3.07276032 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 158 3.21e-34   NTclustered gi|1002455621|ref|XM_015800349.1| 157538 g9931 i0 83.735 73.9016393442623 166 27 91 0 3 168 282 117 Leptomonas pyrrhocoris 40S ribosomal protein S14 mRNA blastn 13524 158 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
9333378 9333378 PRJNA384462_S_NODE_12268_length_170_cov_1.148760_g12152_i0 PRJNA384462 12268 170 1.14876 1.952892 Neobodo designis 312471 Euglenozoa other_Eukaryota 259 7.8e-65   NTclustered gi|116222274|gb|DQ980523.1| 312471 g12152 i0 94.611 102.211764705882 167 9 98 0 4 170 276 110 Neobodo designis clone ndtub2 beta tubulin gene, partial cds blastn 17376 259 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
11884002 11884002 PRJNA384462_S_NODE_2370_length_338_cov_1.207612_g2254_i0 PRJNA384462 2370 338 1.207612 4.08172856 Paratrypanosoma confusum 1470209 Euglenozoa other_Eukaryota 267 1.05e-66   NTclustered gi|452769200|gb|KC534762.1| 1470209 g2254 i0 81.682 98.3254437869822 333 49 97 11 1 327 327 1 Trypanosomatidae sp. TS-2013 clone C3440L3957o6 hypothetical protein gene, partial cds blastn 33234 267 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Paratrypanosoma Paratrypanosoma confusum
13159064 13159064 PRJNA384462_S_NODE_4691_length_247_cov_1.030303_g4575_i0 PRJNA384462 4691 247 1.030303 2.54484841 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 255 1.59e-63   NTclustered gi|2794835786|ref|XM_067901644.1| 2761500 g4575 i0 85.597 26.9068825910931 243 35 98 0 4 246 266 24 Porcisia hertigi uncharacterized protein (JKF63_05688), partial mRNA blastn 6646 255 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
14434068 14434068 PRJNA384462_S_NODE_8092_length_199_cov_1.020000_g7976_i0 PRJNA384462 8092 199 1.02 2.0298 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 255 1.23e-63   NTclustered gi|1673142105|ref|XM_029373822.1| 83891 g7976 i0 89.95 26.1407035175879 199 18 99 2 2 199 107 304 Trypanosoma conorhini uncharacterized protein (Tco025E_06955), partial mRNA blastn 5202 255 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
16378331 16378331 PRJNA384462_S_NODE_13273_length_166_cov_0.871795_g13157_i0 PRJNA384462 13273 166 0.871795 1.4471797 Leishmania 5658 Euglenozoa other_Eukaryota 150 4.79e-32   NTclustered gi|2593248390|emb|OY748414.1| 5660 g13157 i0 83.636 20.0963855421687 165 21 98 5 5 166 2594236 2594397 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 20 blastn 3336 150 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
16982669 16982669 PRJNA384462_S_NODE_10714_length_179_cov_1.176923_g10598_i0 PRJNA384462 10714 179 1.176923 2.10669217 Leishmania tarentolae 5689 Euglenozoa other_Eukaryota 191 3.08e-44   NTclustered gi|312487|emb|X73119.1| 5689 g10598 i0 86.286 59.340782122905 175 24 98 0 1 175 440 614 L.tarentolae LtUB-EP52 (A) gene for ubiquitin-fusion protein blastn 10622 191 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae
22081752 22081752 PRJNA384462_S_NODE_11778_length_173_cov_1.217742_g11662_i0 PRJNA384462 11778 173 1.217742 2.10669366 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 178 2.3e-40   NTclustered gi|1673134151|ref|XM_029369857.1| 83891 g11662 i0 85.549 24.0867052023121 173 21 99 3 3 173 315 145 Trypanosoma conorhini elongation factor 2 (Tco025E_02934), partial mRNA blastn 4167 178 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
22081770 22081770 PRJNA384462_S_NODE_16158_length_153_cov_2.278846_g16042_i0 PRJNA384462 16158 153 2.278846 3.48663438 Bodo saltans 75058 Euglenozoa other_Eukaryota 206 9.09e-49   NTclustered gi|301014698|gb|GQ377700.1| 75058 g16042 i0 90.85 19.6143790849673 153 14 100 0 1 153 243 91 Bodo saltans ribosomal protein S23a (rps23a) mRNA, complete cds blastn 3001 206 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;