RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA384462 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405341 405341 PRJNA384462_S_NODE_3861_length_268_cov_1.598174_g3745_i0 PRJNA384462 3861 268 1.598174 4.28310632 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.007   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g3745 i0 100 0.108208955223881 29 0 11 0 16 44 8320375 8320403 Anemonia sulcata genome assembly, chromosome: 19 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
18927371 18927371 PRJNA384462_S_NODE_335_length_797_cov_340.760695_g263_i0 PRJNA384462 335 797 340.760695 2715.86273915 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 99 1.01e-15   NTclustered gi|527502257|gb|KC864804.1| 1366484 g263 i0 93.846 9.44667503136763 65 3 8 1 41 105 779 842 Ovabunda biseriata voucher 1201944 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7529 99 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Ovabunda Ovabunda biseriata
20806940 20806940 PRJNA384462_S_NODE_8377_length_196_cov_2.272109_g8261_i0 PRJNA384462 8377 196 2.272109 4.45333364 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.001   NTclustered gi|2918369555|emb|OZ237727.1| 317547 g8261 i0 100 0.295918367346939 30 0 15 0 72 101 1823481 1823452 Eunicella cavolini genome assembly, chromosome: 11 blastn 58 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;