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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA384462 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1075814 1075814 PRJNA384462_S_NODE_3981_length_265_cov_1.523148_g3865_i0 PRJNA384462 3981 265 1.523148 4.0363422 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 219 2.2599999999999998e-52   NTclustered gi|1843568304|ref|XM_034563737.1| 5823 g3865 i0 90.419 86.9849056603774 167 14 63 2 1 166 63 228 Plasmodium berghei ANKA polyubiquitin, putative (PBANKA_0610300), partial mRNA blastn 23051 219 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
1680202 1680202 PRJNA384462_S_NODE_8922_length_192_cov_0.923077_g8806_i0 PRJNA384462 8922 192 0.923077 1.77230784 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 320 4.1e-83   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8806 i0 97.838 70.9739583333333 185 4 98 0 8 192 116529 116345 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 13627 320 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
6783040 6783040 PRJNA384462_S_NODE_7586_length_204_cov_1.096774_g7470_i0 PRJNA384462 7586 204 1.096774 2.23741896 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 217 5.959999999999999e-52   NTclustered gi|1027950138|ref|XM_016797486.1| 31271 g7470 i0 86.07 16.671568627451 201 28 99 0 4 204 878 678 Plasmodium chabaudi chabaudi polyubiquitin (PCHAS_0612000), partial mRNA blastn 3401 217 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
8058603 8058603 PRJNA384462_S_NODE_12247_length_170_cov_1.264463_g12131_i0 PRJNA384462 12247 170 1.264463 2.1495871 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.001   NTclustered gi|1620166635|ref|XM_028681227.1| 880535 g12131 i0 100 0.552941176470588 30 0 18 0 141 170 7930 7901 Plasmodium sp. gorilla clade G2 conserved Plasmodium membrane protein, unknown function (PADL01_0719000), partial mRNA blastn 94 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
8728547 8728547 PRJNA384462_S_NODE_7887_length_201_cov_1.000000_g7771_i0 PRJNA384462 7887 201 1 2.01 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 209 9.8e-50   NTclustered gi|1270518543|ref|XM_719220.2| 5861 g7771 i0 85.787 94.955223880597 197 28 98 0 3 199 1268 1072 Plasmodium yoelii uncharacterized protein (PY17X_0524100), partial mRNA blastn 19086 211 0.990521327014218 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
17653438 17653438 PRJNA384462_S_NODE_3154_length_293_cov_3.631148_g3038_i0 PRJNA384462 3154 293 3.631148 10.63926364 root 1 Root_unresolved Root_unresolved 78.7 4.48e-10   NTclustered gi|379988059|dbj|AB649418.1| 5858 g3038 i0 78.832 27.6587030716724 137 14 46 11 7 142 26549 26427 Plasmodium malariae apicoplast DNA, partial sequence, strain: Kisii67 blastn 8104 78.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
18256834 18256834 PRJNA384462_S_NODE_15695_length_159_cov_2.309091_g15579_i0 PRJNA384462 15695 159 2.309091 3.67145469 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|915125354|ref|XM_013478487.1| 5804 g15579 i0 94.286 0.220125786163522 35 2 22 0 1 35 2741 2707 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 35 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
19531158 19531158 PRJNA384462_S_NODE_13556_length_165_cov_1.318966_g13440_i0 PRJNA384462 13556 165 1.318966 2.1762939 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 128 2.23e-25   NTclustered gi|1673123994|ref|XM_029360740.1| 94643 g13440 i0 80.723 1.00606060606061 166 30 100 2 1 165 379 215 Besnoitia besnoiti ribosomal-ubiquitin protein RPL40 (BESB_020310), partial mRNA blastn 166 128 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
19531168 19531168 PRJNA384462_S_NODE_15036_length_162_cov_0.902655_g14920_i0 PRJNA384462 15036 162 0.902655 1.4623011 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 165 1.66e-36   NTclustered gi|1084856234|ref|XM_018785850.1| 647221 g14920 i0 85.897 33.0061728395062 156 20 96 2 5 159 755 601 Plasmodium gaboni putative 26S protease regulatory subunit 4 partial mRNA blastn 5347 165 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
20806902 20806902 PRJNA384462_S_NODE_13997_length_164_cov_1.252174_g13881_i0 PRJNA384462 13997 164 1.252174 2.05356536 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 150 4.72e-32   NTclustered gi|2787714852|ref|XM_067339599.1| 515981 g13881 i0 89.167 18.8231707317073 120 13 73 0 6 125 993 874 Cryptosporidium ryanae 26S proteasome regulatory subunit 7 (RPT1)-like AAA atpase (FG386_000098), partial mRNA blastn 3087 150 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
24027556 24027556 PRJNA384462_S_NODE_10399_length_181_cov_1.151515_g10283_i0 PRJNA384462 10399 181 1.151515 2.08424215 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 147 6.859999999999999e-31   NTclustered gi|112434011|gb|DQ846900.1| 5833 g10283 i0 81.818 42.4861878453039 187 22 100 8 1 181 563 743 Plasmodium falciparum eIF4A-like gene, complete cds blastn 7690 147 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;