RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA384462 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15708101 15708101 PRJNA384462_S_NODE_9233_length_189_cov_1.778571_g9117_i0 PRJNA384462 9233 189 1.778571 3.36149919 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.005   NTclustered gi|2309594316|gb|OP536747.1| 10244 g9117 i0 100 15.3439153439153 29 0 15 0 51 79 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
18256815 18256815 PRJNA384462_S_NODE_12875_length_167_cov_0.864407_g12759_i0 PRJNA384462 12875 167 0.864407 1.44355969 Moumouvirus australiense 3080759 Viruses Viruses 52.8 0.014   NTclustered gi|2500366567|ref|NC_075368.1| 2109587 g12759 i0 100 0.167664670658683 28 0 17 0 72 99 521700 521673 Moumouvirus australiensis isolate 10A, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus australiense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;