RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA384462 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405330 405330 PRJNA384462_S_NODE_16321_length_151_cov_2.264706_g16205_i0 PRJNA384462 16321 151 2.264706 3.41970606 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 65.8 1.58e-6   NTclustered gi|2794975353|ref|XM_067871175.1| 2049356 g16205 i0 95.238 24.0132450331126 42 1 27 1 87 127 5611 5570 Monocercomonoides exilis uncharacterized protein (MONOS_18181), partial mRNA blastn 3626 65.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
405362 405362 PRJNA384462_S_NODE_781_length_575_cov_8.912548_g677_i0 PRJNA384462 781 575 8.912548 51.247151 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 65.8 7.29e-6   NTclustered gi|2319615616|ref|XR_007835995.1| 412133 g677 i0 90.385 0.330434782608696 52 2 9 3 110 160 2561 2610 Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0034210), rRNA blastn 190 65.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
6782998 6782998 PRJNA384462_S_NODE_12326_length_169_cov_2.541667_g12210_i0 PRJNA384462 12326 169 2.541667 4.29541723 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 3.03e-4   NTclustered gi|2794953232|ref|XM_067878233.1| 2049356 g12210 i0 100 2.24260355029586 31 0 18 0 136 166 527 497 Monocercomonoides exilis uncharacterized protein (MONOS_7873), partial mRNA blastn 379 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;