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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA384462" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA384462 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405311 405311 PRJNA384462_S_NODE_12581_length_168_cov_1.285714_g12465_i0 PRJNA384462 12581 168 1.285714 2.15999952 Dictyostelium purpureum 5786 Evosea other_Eukaryota 244 2.1699999999999999e-60   NTclustered gi|330799499|ref|XM_003287734.1| 5786 g12465 i0 92.857 95.4821428571429 168 12 100 0 1 168 240 73 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_72359), partial mRNA blastn 16041 244 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
405364 405364 PRJNA384462_S_NODE_8161_length_198_cov_1.885906_g8045_i0 PRJNA384462 8161 198 1.885906 3.73409388 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 366 5.4e-97   NTclustered gi|909719645|gb|KT185625.1| 5778 g8045 i0 100 83.530303030303 198 0 100 0 1 198 4673 4870 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 16539 366 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
1680182 1680182 PRJNA384462_S_NODE_4262_length_257_cov_1.375000_g4146_i0 PRJNA384462 4262 257 1.375 3.53375 Dictyostelium discoideum 44689 Evosea other_Eukaryota 193 1.32e-44   NTclustered gi|66805758|ref|XM_631509.1| 352472 g4146 i0 81.172 8.44747081712062 239 45 93 0 7 245 322 560 Dictyostelium discoideum AX4 protein serine/threonine kinase (cdk5) mRNA, complete cds blastn 2171 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5508990 5508990 PRJNA384462_S_NODE_11365_length_175_cov_1.476190_g11249_i0 PRJNA384462 11365 175 1.47619 2.5833325 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 324 2.83e-84   NTclustered gi|365928255|gb|JN825705.1| 590481 g11249 i0 100 32.28 175 0 100 0 1 175 755 929 Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence blastn 5649 324 1 Eukaryota Amoebozoa             uncultured Amoebozoa
6178807 6178807 PRJNA384462_S_NODE_11485_length_174_cov_2.480000_g11369_i0 PRJNA384462 11485 174 2.48 4.3152 Vermamoeba 1260114 Tubulinea other_Eukaryota 320 3.63e-83   NTclustered gi|300078496|gb|GU001158.1| 5778 g11369 i0 100 5.28735632183908 173 0 99 0 2 174 1620 1448 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 920 320 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7453859 7453859 PRJNA384462_S_NODE_6346_length_218_cov_1.159763_g6230_i0 PRJNA384462 6346 218 1.159763 2.52828334 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.005   NTclustered gi|330842687|ref|XM_003293257.1| 5786 g6230 i0 100 0.279816513761468 29 0 13 0 10 38 320 348 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_93025), mRNA blastn 61 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
7453862 7453862 PRJNA384462_S_NODE_6806_length_212_cov_3.349693_g6690_i0 PRJNA384462 6806 212 3.349693 7.10134916 Vermamoeba 1260114 Tubulinea other_Eukaryota 370 4.53e-98   NTclustered gi|909719645|gb|KT185625.1| 5778 g6690 i0 98.113 92.5754716981132 212 4 100 0 1 212 4899 5110 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19626 370 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
11279061 11279061 PRJNA384462_S_NODE_4489_length_251_cov_1.737624_g4373_i0 PRJNA384462 4489 251 1.737624 4.36143624 Eumycetozoa 142796 Evosea other_Eukaryota 315 2.6299999999999998e-81   NTclustered gi|470266101|ref|XM_004361626.1| 261658 g4373 i0 89.243 99.2629482071713 251 27 100 0 1 251 510 260 Cavenderia fasciculata uncharacterized protein (DFA_05968), partial mRNA blastn 24915 315 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
13159028 13159028 PRJNA384462_S_NODE_11931_length_172_cov_1.235772_g11815_i0 PRJNA384462 11931 172 1.235772 2.12552784 Ripella decalvata 2047822 Discosea other_Eukaryota 241 2.87e-59   NTclustered gi|1269228433|gb|MF683558.1| 2047822 g11815 i0 91.86 88.1511627906977 172 14 100 0 1 172 937 766 Ripella decalvata clone 26.2.14 18S ribosomal RNA gene, partial sequence blastn 15162 241 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
15103683 15103683 PRJNA384462_S_NODE_8132_length_198_cov_3.711409_g8016_i0 PRJNA384462 8132 198 3.711409 7.34858982 Vermamoeba 1260114 Tubulinea other_Eukaryota 350 5.44e-92   NTclustered gi|909719645|gb|KT185625.1| 5778 g8016 i0 98.485 3 198 3 100 0 1 198 5137 5334 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 594 350 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
15708032 15708032 PRJNA384462_S_NODE_10133_length_182_cov_8.676692_g10017_i0 PRJNA384462 10133 182 8.676692 15.79157944 Paraflabellula hoguae 136459 Tubulinea other_Eukaryota 115 1.95e-21   NTclustered gi|145386791|gb|EF216916.1| 136459 g10017 i0 92.5 41.8296703296703 80 6 62 0 99 178 1498 1419 Paraflabellula hoguae 28S large subunit ribosomal RNA gene, partial sequence blastn 7613 115 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Paraflabellula Paraflabellula hoguae
16982701 16982701 PRJNA384462_S_NODE_394_length_745_cov_194.385057_g319_i0 PRJNA384462 394 745 194.385057 1448.16867465 Paramoeba perurans 437603 Discosea other_Eukaryota 272 5.26e-68   NTclustered gi|145386786|gb|EF216911.1| 437603 g319 i0 78.378 18.0872483221477 444 79 59 12 59 494 1 435 Neoparamoeba perurans strain GD-HAC/2/2 28S large subunit ribosomal RNA gene, partial sequence blastn 13475 272 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
16982715 16982715 PRJNA384462_S_NODE_5834_length_225_cov_1.886364_g5718_i0 PRJNA384462 5834 225 1.886364 4.244319 Acytostelium subglobosum 361139 Evosea other_Eukaryota 52.8 0.02   NTclustered gi|831756844|ref|XM_012893394.1| 1410327 g5718 i0 100 0.124444444444444 28 0 12 0 121 148 2734 2707 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
17653457 17653457 PRJNA384462_S_NODE_7474_length_205_cov_1.814103_g7358_i0 PRJNA384462 7474 205 1.814103 3.71891115 Vermamoeba 1260114 Tubulinea other_Eukaryota 374 3.3599999999999997e-99   NTclustered gi|300078496|gb|GU001158.1| 5778 g7358 i0 99.512 44.1219512195122 205 1 100 0 1 205 2700 2904 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9045 374 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
19531208 19531208 PRJNA384462_S_NODE_9276_length_189_cov_1.092857_g9160_i0 PRJNA384462 9276 189 1.092857 2.06549973 Dictyostelium purpureum 5786 Evosea other_Eukaryota 233 5.399999999999999e-57   NTclustered gi|330841829|ref|XM_003292845.1| 5786 g9160 i0 88.889 96.5555555555556 189 21 100 0 1 189 253 65 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_73394), mRNA blastn 18249 233 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
20202010 20202010 PRJNA384462_S_NODE_4576_length_249_cov_2.445000_g4460_i0 PRJNA384462 4576 249 2.445 6.08805 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 449 6.840000000000001e-122   NTclustered gi|909719645|gb|KT185625.1| 5778 g4460 i0 99.197 40.2168674698795 249 2 100 0 1 249 3619 3867 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 10014 449 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
21477538 21477538 PRJNA384462_S_NODE_3997_length_264_cov_4.116279_g3881_i0 PRJNA384462 3997 264 4.116279 10.86697656 Dictyostelium 5782 Evosea other_Eukaryota 207 4.86e-49   NTclustered gi|2367630|gb|AF016242.1|AF016242 44689 g3881 i0 83.857 70.9962121212121 223 30 83 5 1 220 387 606 Dictyostelium discoideum protein synthesis elongation factor 1-alpha (tef2) gene, partial cds blastn 18743 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22081785 22081785 PRJNA384462_S_NODE_6738_length_213_cov_1.890244_g6622_i0 PRJNA384462 6738 213 1.890244 4.02621972 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 388 1.26e-103   NTclustered gi|300078496|gb|GU001158.1| 5778 g6622 i0 99.531 2 213 1 100 0 1 213 3438 3650 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 426 388 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23357383 23357383 PRJNA384462_S_NODE_3479_length_280_cov_2.809524_g3363_i0 PRJNA384462 3479 280 2.809524 7.8666672 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 481 2.78e-131   NTclustered gi|909719645|gb|KT185625.1| 5778 g3363 i0 97.842 1.79642857142857 278 6 99 0 2 279 7097 6820 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 503 481 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23357396 23357396 PRJNA384462_S_NODE_5759_length_226_cov_2.802260_g5643_i0 PRJNA384462 5759 226 2.80226 6.3331076 Paravannella minima 1443144 Discosea other_Eukaryota 137 5.400000000000001e-28   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g5643 i0 79.512 55.0486725663717 205 33 88 9 22 221 3129 2929 Paravannella minima mitochondrion, complete genome blastn 12441 137 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
23357399 23357399 PRJNA384462_S_NODE_599_length_636_cov_6.865417_g507_i0 PRJNA384462 599 636 6.865417 43.66405212 Dictyostelium discoideum 44689 Evosea other_Eukaryota 449 1.9199999999999995e-121   NTclustered gi|66805384|ref|XM_631333.1| 352472 g507 i0 79.499 94.0188679245283 639 125 100 6 1 636 398 1033 Dictyostelium discoideum AX4 hypothetical protein (act4) mRNA, complete cds blastn 59796 449 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;