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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA382558" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382558 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1679661 1679661 PRJNA382558_S_NODE_13782_length_157_cov_3.858333_g13778_i0 PRJNA382558 13782 157 3.858333 6.05758281 Geothrix sp. 1962974 Bacteria Bacteria 106 9.8e-19   NTclustered gi|2515262989|gb|CP126625.1| 1962974 g13778 i0 93.056 5.07643312101911 72 5 46 0 1 72 715190 715261 MAG: Geothrix sp. isolate L227-G1 chromosome, complete genome blastn 797 106 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp.
1679770 1679770 PRJNA382558_S_NODE_5182_length_209_cov_7.837209_g5178_i0 PRJNA382558 5182 209 7.837209 16.37976681 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 178 2.9e-40   NTclustered gi|2874253678|emb|OY969112.1| 171953 g5178 i0 83.871 6.08612440191388 186 30 89 0 21 206 2738608 2738793 MAG: uncultured Acidobacteriota bacterium isolate MFD04212.bin.1.16 genome assembly, chromosome: 1 blastn 1272 178 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
4232005 4232005 PRJNA382558_S_NODE_16064_length_150_cov_4.345133_g16060_i0 PRJNA382558 16064 150 4.345133 6.5176995 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 117 4.27e-22   NTclustered gi|2874254057|emb|OY970381.1| 194844 g16060 i0 84.874 11.26 119 14 78 4 18 134 2148776 2148660 MAG: uncultured Acidobacteriaceae bacterium isolate MFD04580.bin.1.19 genome assembly, chromosome: 1 blastn 1689 117 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
6782724 6782724 PRJNA382558_S_NODE_8666_length_180_cov_8.216783_g8662_i0 PRJNA382558 8666 180 8.216783 14.7902094 Thermoanaerobaculaceae bacterium 2699758 Bacteria Bacteria 161 2.43e-35   NTclustered gi|2874254005|emb|OY970330.1| 2699758 g8662 i0 86.806 39.1444444444444 144 19 80 0 1 144 8565646 8565503 MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 blastn 7046 161 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Thermoanaerobaculaceae   Thermoanaerobaculaceae bacterium
8058261 8058261 PRJNA382558_S_NODE_6527_length_196_cov_5.955975_g6523_i0 PRJNA382558 6527 196 5.955975 11.673711 Thermoanaerobaculaceae bacterium 2699758 Bacteria Bacteria 180 7.45e-41   NTclustered gi|2874254005|emb|OY970330.1| 2699758 g6523 i0 83.417 104.55612244898 199 28 100 4 1 196 4877695 4877499 MAG: Thermoanaerobaculaceae bacterium isolate MFD05537.bin.c.1 genome assembly, chromosome: 1 blastn 20493 180 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Thermoanaerobaculaceae   Thermoanaerobaculaceae bacterium
10608817 10608817 PRJNA382558_S_NODE_8269_length_183_cov_4.431507_g8265_i0 PRJNA382558 8269 183 4.431507 8.10965781 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 139 1.1599999999999999e-28   NTclustered gi|2814788339|emb|OY761475.2| 2910147 g8265 i0 81.609 1.72131147540984 174 27 95 4 11 183 4962906 4963075 MAG: Vicinamibacterales bacterium isolate 01def6b1-0c8c-435d-859a-076764f3ef92 genome assembly, chromosome: 1 blastn 315 139 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
19530784 19530784 PRJNA382558_S_NODE_4816_length_214_cov_4.581921_g4812_i0 PRJNA382558 4816 214 4.581921 9.80531094 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 147 8.41e-31   NTclustered gi|2874254167|emb|OY970399.1| 171953 g4812 i0 79.358 1.57009345794393 218 37 100 8 1 214 3954108 3954321 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.6 genome assembly, chromosome: 1 blastn 336 147 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19530836 19530836 PRJNA382558_S_NODE_7056_length_191_cov_9.805195_g7052_i0 PRJNA382558 7056 191 9.805195 18.72792245 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 93.5 9.68e-15   NTclustered gi|2621704939|emb|OY762226.1| 2910147 g7052 i0 83.333 5.34031413612565 102 15 53 2 4 104 5017743 5017643 MAG: Vicinamibacterales bacterium isolate 0d5134ca-f8ab-4963-ab29-a032ed897002 genome assembly, chromosome: 1 blastn 1020 93.5 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;