contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 404184 | 404184 | PRJNA382357_P_NODE_65081_length_292_cov_2.532468_g64342_i0 | PRJNA382357 | 65081 | 292 | 2.532468 | 7.39480656 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 442 | 1.3699999999999994e-119 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g64342 | i0 | 94.198 | 105.33904109589 | 293 | 12 | 99 | 5 | 3 | 292 | 3893321 | 3893611 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 30759 | 442 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 1678188 | 1678188 | PRJNA382357_P_NODE_18022_length_516_cov_1.463736_g17292_i0 | PRJNA382357 | 18022 | 516 | 1.463736 | 7.55287776 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 481 | 5.44e-131 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g17292 | i0 | 91.691 | 154.085271317829 | 349 | 26 | 85 | 3 | 138 | 485 | 2750152 | 2750498 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 79508 | 481 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2953366 | 2953366 | PRJNA382357_P_NODE_128503_length_215_cov_9.110390_g127764_i0 | PRJNA382357 | 128503 | 215 | 9.11039 | 19.5873385 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 148 | 2.35e-31 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g127764 | i0 | 86.567 | 0.623255813953488 | 134 | 18 | 62 | 0 | 82 | 215 | 2307294 | 2307427 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 134 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 4229614 | 4229614 | PRJNA382357_P_NODE_109584_length_232_cov_8.286550_g108845_i0 | PRJNA382357 | 109584 | 232 | 8.28655 | 19.224796 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 135 | 2e-27 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g108845 | i0 | 89.623 | 15.4741379310345 | 106 | 11 | 71 | 0 | 127 | 232 | 589694 | 589589 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 3590 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 4231394 | 4231394 | PRJNA382357_P_NODE_66544_length_289_cov_3.442982_g65805_i0 | PRJNA382357 | 66544 | 289 | 3.442982 | 9.95021798 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 196 | 1.17e-45 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g65805 | i0 | 99.083 | 10.8754325259516 | 109 | 1 | 38 | 0 | 6 | 114 | 1315317 | 1315425 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 3143 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5506293 | 5506293 | PRJNA382357_P_NODE_120665_length_222_cov_8.776398_g119926_i0 | PRJNA382357 | 120665 | 222 | 8.776398 | 19.48360356 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g119926 | i0 | 96.774 | 0.13963963963964 | 31 | 1 | 14 | 0 | 129 | 159 | 2439815 | 2439785 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 31 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5507366 | 5507366 | PRJNA382357_P_NODE_33085_length_394_cov_4.912913_g32346_i0 | PRJNA382357 | 33085 | 394 | 4.912913 | 19.35687722 | Actomonas aquatica | 2866162 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|2647674565|gb|CP139781.1| | 2866162 | g32346 | i0 | 100 | 0.0736040609137056 | 29 | 0 | 7 | 0 | 166 | 194 | 3697277 | 3697305 | Actomonas aquatica strain WL0086 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Actomonas | Actomonas aquatica | |
| 8056639 | 8056639 | PRJNA382357_P_NODE_2047_length_1237_cov_12.414966_g1586_i0 | PRJNA382357 | 2047 | 1237 | 12.414966 | 153.57312942 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 597 | 1.2899999999999998e-165 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g1586 | i0 | 86.572 | 51.6119644300728 | 566 | 47 | 92 | 21 | 103 | 663 | 3411200 | 3410659 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 63844 | 597 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 13156286 | 13156286 | PRJNA382357_P_NODE_116891_length_226_cov_1.181818_g116152_i0 | PRJNA382357 | 116891 | 226 | 1.181818 | 2.67090868 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 357 | 3.81e-94 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g116152 | i0 | 95.133 | 38.4601769911504 | 226 | 11 | 100 | 0 | 1 | 226 | 3893912 | 3893687 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 8692 | 357 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15705487 | 15705487 | PRJNA382357_P_NODE_130993_length_213_cov_7.927632_g130254_i0 | PRJNA382357 | 130993 | 213 | 7.927632 | 16.88585616 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 231 | 2.24e-56 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g130254 | i0 | 97.761 | 227.643192488263 | 134 | 3 | 96 | 0 | 1 | 134 | 3411747 | 3411614 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 48488 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 15707056 | 15707056 | PRJNA382357_P_NODE_74493_length_275_cov_11.046729_g73754_i0 | PRJNA382357 | 74493 | 275 | 11.046729 | 30.37850475 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 255 | 1.79e-63 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g73754 | i0 | 90.674 | 2.88363636363636 | 193 | 16 | 70 | 2 | 1 | 192 | 28187 | 28378 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 793 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 15707091 | 15707091 | PRJNA382357_P_NODE_76353_length_272_cov_14.549763_g75614_i0 | PRJNA382357 | 76353 | 272 | 14.549763 | 39.57535536 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 337 | 6.15e-88 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g75614 | i0 | 98.936 | 292.955882352941 | 188 | 2 | 100 | 0 | 1 | 188 | 456796 | 456983 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 79684 | 337 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 15707115 | 15707115 | PRJNA382357_P_NODE_77633_length_270_cov_4.956938_g76894_i0 | PRJNA382357 | 77633 | 270 | 4.956938 | 13.3837326 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 128 | 4e-25 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g76894 | i0 | 86.441 | 0.437037037037037 | 118 | 14 | 43 | 2 | 1 | 117 | 1391862 | 1391746 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 118 | 128 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 19528916 | 19528916 | PRJNA382357_P_NODE_15316_length_551_cov_25.571429_g14592_i0 | PRJNA382357 | 15316 | 551 | 25.571429 | 140.89857379 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 582 | 1.5599999999999996e-161 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g14592 | i0 | 88.66 | 150.098003629764 | 485 | 45 | 87 | 8 | 1 | 480 | 15846 | 15367 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 82704 | 582 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 19529297 | 19529297 | PRJNA382357_P_NODE_20896_length_483_cov_4.123223_g20161_i0 | PRJNA382357 | 20896 | 483 | 4.123223 | 19.91516709 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 363 | 1.91e-95 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g20161 | i0 | 83.293 | 158.291925465839 | 413 | 50 | 84 | 17 | 2 | 407 | 15382 | 15782 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 76455 | 363 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 20804627 | 20804627 | PRJNA382357_P_NODE_154037_length_202_cov_22.078014_g153298_i0 | PRJNA382357 | 154037 | 202 | 22.078014 | 44.59758828 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 172 | 1.2899999999999999e-38 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g153298 | i0 | 91.935 | 14.5544554455446 | 124 | 9 | 100 | 1 | 80 | 202 | 781758 | 781635 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 2940 | 172 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 20805518 | 20805518 | PRJNA382357_P_NODE_51017_length_325_cov_3.522727_g50278_i0 | PRJNA382357 | 51017 | 325 | 3.522727 | 11.44886275 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 381 | 3.429999999999999e-101 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g50278 | i0 | 91.398 | 6.4 | 279 | 23 | 86 | 1 | 25 | 302 | 1270223 | 1270501 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 2080 | 381 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20805848 | 20805848 | PRJNA382357_P_NODE_69957_length_283_cov_1.572072_g69218_i0 | PRJNA382357 | 69957 | 283 | 1.572072 | 4.44896376 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 73.1 | 2e-8 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g69218 | i0 | 80.208 | 0.339222614840989 | 96 | 19 | 34 | 0 | 165 | 260 | 2688544 | 2688639 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 96 | 73.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 22079716 | 22079716 | PRJNA382357_P_NODE_162818_length_190_cov_7.751938_g162079_i0 | PRJNA382357 | 162818 | 190 | 7.751938 | 14.7286822 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 87.9 | 4.47e-13 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g162079 | i0 | 88.312 | 0.405263157894737 | 77 | 4 | 40 | 4 | 112 | 187 | 2466961 | 2467033 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 77 | 87.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 22080343 | 22080343 | PRJNA382357_P_NODE_42378_length_353_cov_2.301370_g41639_i0 | PRJNA382357 | 42378 | 353 | 2.30137 | 8.1238361 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 156 | 2.47e-33 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g41639 | i0 | 88.55 | 11.4079320113314 | 131 | 12 | 37 | 3 | 3 | 133 | 440327 | 440454 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 4027 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 22080682 | 22080682 | PRJNA382357_P_NODE_6498_length_788_cov_5.572215_g5847_i0 | PRJNA382357 | 6498 | 788 | 5.572215 | 43.9090542 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 472 | 5.119999999999998e-128 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g5847 | i0 | 94.719 | 63.1281725888325 | 303 | 16 | 99 | 0 | 1 | 303 | 3557183 | 3557485 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 49745 | 472 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 22080934 | 22080934 | PRJNA382357_P_NODE_79778_length_267_cov_1.737864_g79039_i0 | PRJNA382357 | 79778 | 267 | 1.737864 | 4.64009688 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 255 | 1.73e-63 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g79039 | i0 | 84.015 | 1.00749063670412 | 269 | 40 | 100 | 2 | 1 | 267 | 228782 | 229049 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 269 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23354768 | 23354768 | PRJNA382357_P_NODE_126399_length_217_cov_2.820513_g125660_i0 | PRJNA382357 | 126399 | 217 | 2.820513 | 6.12051321 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 148 | 2.38e-31 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g125660 | i0 | 95.652 | 34.9308755760369 | 92 | 4 | 42 | 0 | 6 | 97 | 3718600 | 3718691 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 7580 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 24629254 | 24629254 | PRJNA382357_P_NODE_14180_length_569_cov_26.818898_g13459_i0 | PRJNA382357 | 14180 | 569 | 26.818898 | 152.59952962 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 523 | 9.889999999999997e-144 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g13459 | i0 | 97.097 | 263.924428822496 | 310 | 9 | 100 | 0 | 168 | 477 | 3412420 | 3412729 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 150173 | 523 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;