contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 403022 | 403022 | PRJNA382357_P_NODE_151761_length_203_cov_10.746479_g151022_i0 | PRJNA382357 | 151761 | 203 | 10.746479 | 21.81535237 | Geobacter pickeringii | 345632 | Bacteria | Bacteria | 63.9 | 8.17e-6 | NTclustered | gi|747129828|gb|CP009788.1| | 345632 | g151022 | i0 | 95 | 0.911330049261084 | 40 | 2 | 37 | 0 | 123 | 162 | 2420362 | 2420323 | Geobacter pickeringii strain G13, complete genome | blastn | 185 | 63.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter pickeringii | ||
| 2954596 | 2954596 | PRJNA382357_P_NODE_51523_length_324_cov_1.224335_g50784_i0 | PRJNA382357 | 51523 | 324 | 1.224335 | 3.9668454 | Desulfarculaceae bacterium | 2528248 | Bacteria | Bacteria | 60.2 | 1.82e-4 | NTclustered | gi|2621780225|emb|OY776512.1| | 2528248 | g50784 | i0 | 100 | 1.44444444444444 | 32 | 0 | 10 | 0 | 293 | 324 | 4381675 | 4381644 | MAG: Desulfarculaceae bacterium isolate e2237022-3439-453f-a1e0-3d3180ebaa11 genome assembly, chromosome: 1 | blastn | 468 | 60.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfarculaceae bacterium | |||
| 4231157 | 4231157 | PRJNA382357_P_NODE_50464_length_327_cov_1.323308_g49725_i0 | PRJNA382357 | 50464 | 327 | 1.323308 | 4.32721716 | Geobacter benzoatilyticus | 2815309 | Bacteria | Bacteria | 235 | 2.84e-57 | NTclustered | gi|2004017374|gb|CP071382.1| | 2815309 | g49725 | i0 | 86.916 | 112.351681957187 | 214 | 22 | 65 | 6 | 1 | 212 | 489020 | 489229 | Geobacter benzoatilyticus strain Jerry-YX chromosome, complete genome | blastn | 36739 | 235 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter benzoatilyticus | ||
| 4231304 | 4231304 | PRJNA382357_P_NODE_59784_length_303_cov_2.400826_g59045_i0 | PRJNA382357 | 59784 | 303 | 2.400826 | 7.27450278 | Geopsychrobacteraceae bacterium | 3065857 | Bacteria | Bacteria | 87.9 | 7.74e-13 | NTclustered | gi|2621702214|emb|OY760196.1| | 3065857 | g59045 | i0 | 96.226 | 18.4587458745875 | 53 | 2 | 17 | 0 | 169 | 221 | 713978 | 713926 | MAG: Geopsychrobacteraceae bacterium isolate 3ac22823-4ae2-415b-96ed-595fc0828211 genome assembly, chromosome: 1 | blastn | 5593 | 87.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Geopsychrobacteraceae | Geopsychrobacteraceae bacterium | |||
| 10002558 | 10002558 | PRJNA382357_P_NODE_11648_length_618_cov_3.235189_g10934_i0 | PRJNA382357 | 11648 | 618 | 3.235189 | 19.99346802 | Geobacteraceae | 213422 | Bacteria | Bacteria | 399 | 1.9e-106 | NTclustered | gi|1886376207|dbj|AP023213.1| | 60035 | g10934 | i0 | 82.516 | 131.883495145631 | 469 | 69 | 76 | 9 | 1 | 467 | 3608782 | 3608325 | Geobacter bremensis R4 DNA, complete genome | blastn | 81504 | 399 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Citrifermentans | Citrifermentans bremense | ||
| 13829092 | 13829092 | PRJNA382357_P_NODE_93371_length_249_cov_14.276596_g92632_i0 | PRJNA382357 | 93371 | 249 | 14.276596 | 35.54872404 | Desulfosarcina | 2299 | Bacteria | Bacteria | 182 | 2.75e-41 | NTclustered | gi|2621713517|emb|OY771548.1| | 218289 | g92632 | i0 | 93.443 | 183.598393574297 | 122 | 8 | 49 | 0 | 94 | 215 | 92240 | 92361 | MAG: uncultured Desulfosarcina sp. isolate c75788b4-9dc9-432e-af07-dc879bdb42fc genome assembly, chromosome: 1 | blastn | 45716 | 182 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | uncultured Desulfosarcina sp. | ||
| 15706629 | 15706629 | PRJNA382357_P_NODE_48133_length_334_cov_1.761905_g47394_i0 | PRJNA382357 | 48133 | 334 | 1.761905 | 5.8847627 | Desulfarculus baarsii | 453230 | Bacteria | Bacteria | 217 | 1.06e-51 | NTclustered | gi|301638057|gb|CP002085.1| | 644282 | g47394 | i0 | 87.978 | 46.0149700598802 | 183 | 22 | 55 | 0 | 102 | 284 | 874793 | 874975 | Desulfarculus baarsii DSM 2075, complete genome | blastn | 15369 | 217 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfarculia | Desulfarculales | Desulfarculaceae | Desulfarculus | Desulfarculus baarsii | ||
| 16980710 | 16980710 | PRJNA382357_P_NODE_172154_length_165_cov_36.567308_g171415_i0 | PRJNA382357 | 172154 | 165 | 36.567308 | 60.3360582 | Syntrophus buswellii | 43774 | Bacteria | Bacteria | 195 | 2.17e-45 | NTclustered | gi|2869717242|gb|CP175563.1| | 43774 | g171415 | i0 | 87.879 | 17.4787878787879 | 165 | 20 | 100 | 0 | 1 | 165 | 33980 | 33816 | Syntrophus buswellii strain DM-2 chromosome, complete genome | blastn | 2884 | 195 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophus | Syntrophus buswellii | ||
| 18256194 | 18256194 | PRJNA382357_P_NODE_94135_length_249_cov_0.792553_g93396_i0 | PRJNA382357 | 94135 | 249 | 0.792553 | 1.97345697 | uncultured Desulfobacter sp. | 240139 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2621717585|emb|OY775937.1| | 240139 | g93396 | i0 | 100 | 0.116465863453815 | 29 | 0 | 12 | 0 | 4 | 32 | 4282414 | 4282386 | MAG: uncultured Desulfobacter sp. isolate 6579293f-26f5-4e71-a9db-d48b61c722da genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | uncultured Desulfobacter sp. | ||
| 18927126 | 18927126 | PRJNA382357_P_NODE_96015_length_246_cov_5.194595_g95276_i0 | PRJNA382357 | 96015 | 246 | 5.194595 | 12.7787037 | Desulfobulbaceae | 213121 | Bacteria | Bacteria | 119 | 2.16e-22 | NTclustered | gi|296923907|gb|CP001940.1| | 589865 | g95276 | i0 | 95.89 | 50.1422764227642 | 73 | 3 | 50 | 0 | 12 | 84 | 279684 | 279612 | Desulfurivibrio alkaliphilus AHT2, complete genome | blastn | 12335 | 119 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfobulbaceae | Desulfurivibrio | Desulfurivibrio alkaliphilus | ||
| 22751829 | 22751829 | PRJNA382357_P_NODE_20518_length_487_cov_2.624413_g19784_i0 | PRJNA382357 | 20518 | 487 | 2.624413 | 12.78089131 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 466 | 1.4299999999999997e-126 | NTclustered | gi|2869717242|gb|CP175563.1| | 43774 | g19784 | i0 | 84.146 | 234.11704312115 | 492 | 67 | 100 | 8 | 1 | 487 | 2333244 | 2332759 | Syntrophus buswellii strain DM-2 chromosome, complete genome | blastn | 114015 | 466 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophus | Syntrophus buswellii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;