RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6177491 6177491 PRJNA382357_P_NODE_131005_length_213_cov_7.513158_g130266_i0 PRJNA382357 131005 213 7.513158 16.00302654 Plakinidae 81001 Porifera other_Eukaryota 147 8.359999999999999e-31   NTclustered gi|2664284966|ref|XR_009969824.1| 121492 g130266 i0 98.78 38.8920187793427 82 1 38 0 1 82 1650 1569 PREDICTED: Corticium candelabrum small subunit ribosomal RNA (LOC134179215), rRNA blastn 8284 147 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
20200872 20200872 PRJNA382357_P_NODE_155076_length_202_cov_1.368794_g154337_i0 PRJNA382357 155076 202 1.368794 2.76496388 Opisthokonta 33154 Porifera other_Eukaryota 174 3.6e-39   NTclustered gi|512765322|gb|KC869560.1| 798311 g154337 i0 89.781 69.5 137 12 67 2 21 156 479 614 Ptilocaulis spiculifer voucher NCI205 28S ribosomal RNA gene, partial sequence blastn 14039 174 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Axinellida Axinellidae Ptilocaulis Ptilocaulis spiculifer

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;