RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA382357 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2953854 2953854 PRJNA382357_P_NODE_162723_length_190_cov_16.062016_g161984_i0 PRJNA382357 162723 190 16.062016 30.5178304 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 243 9.02e-60   NTclustered gi|56757963|gb|AY815390.1| 6182 g161984 i0 91.053 122.784210526316 190 2 100 4 1 190 1278 1452 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 23329 243 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
8056161 8056161 PRJNA382357_P_NODE_143287_length_207_cov_1.335616_g142548_i0 PRJNA382357 143287 207 1.335616 2.76472512 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 54.7 0.005   NTclustered gi|687312418|emb|LK532351.1| 57078 g142548 i0 100 0.140096618357488 29 0 14 0 65 93 481 453 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0131038 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
13156297 13156297 PRJNA382357_P_NODE_117711_length_225_cov_1.585366_g116972_i0 PRJNA382357 117711 225 1.585366 3.5670735 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 191 4.06e-44   NTclustered gi|2318751207|ref|XM_012938290.3| 6185 g116972 i0 90.845 18.4311111111111 142 13 64 0 81 222 558 417 Schistosoma haematobium Tubulin beta-4A chain, variant 2 (TUBB4A_1), partial mRNA blastn 4147 191 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
13157086 13157086 PRJNA382357_P_NODE_171471_length_168_cov_2.121495_g170732_i0 PRJNA382357 171471 168 2.121495 3.5641116 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 62.1 2.34e-5   NTclustered gi|1084314048|ref|XM_018792466.1| 6183 g170732 i0 89.583 1.32738095238095 48 5 58 0 121 168 345 392 Schistosoma mansoni 60S ribosomal protein L7, putative partial mRNA blastn 223 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
19529414 19529414 PRJNA382357_P_NODE_28176_length_424_cov_1.903581_g27438_i0 PRJNA382357 28176 424 1.903581 8.07118344 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.011   NTclustered gi|690584527|emb|LN136213.1| 99802 g27438 i0 100 0.0683962264150943 29 0 7 0 63 91 55 83 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0010878 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
20804787 20804787 PRJNA382357_P_NODE_164857_length_185_cov_15.306452_g164118_i0 PRJNA382357 164857 185 15.306452 28.3169362 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 182 1.93e-41   NTclustered gi|56757963|gb|AY815390.1| 6182 g164118 i0 87.654 67.5027027027027 162 12 88 3 24 185 1831 1678 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 12488 182 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23355449 23355449 PRJNA382357_P_NODE_171519_length_167_cov_46.264151_g170780_i0 PRJNA382357 171519 167 46.264151 77.26113217 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 202 1.3099999999999998e-47   NTclustered gi|56757963|gb|AY815390.1| 6182 g170780 i0 91.275 73.0419161676647 149 12 89 1 20 167 2722 2574 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 12198 202 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
24630283 24630283 PRJNA382357_P_NODE_5060_length_876_cov_2.256442_g4447_i0 PRJNA382357 5060 876 2.256442 19.76643192 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 65.8 1.13e-5   NTclustered gi|690528241|emb|LN078101.1| 99802 g4447 i0 100 0.238584474885845 35 0 4 0 399 433 1430 1464 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0075016 blastn 209 65.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;