RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Pisuviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA382357 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1679477 1679477 PRJNA382357_P_NODE_93502_length_249_cov_3.542553_g92763_i0 PRJNA382357 93502 249 3.542553 8.82095697 Qianjiang picobirna-like virus 2 3348870 Viruses Viruses 324 4.33e-84   NTclustered gi|2806502550|gb|PQ054798.1| 3348870 g92763 i0 95.98 200.345381526104 199 8 99 0 51 249 1054 1252 MAG: Qianjiang picobirna-like virus 2 isolate QJ3MS693 genomic sequence blastn 49886 324 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Qianjiang picobirna-like virus 2
2955386 2955386 PRJNA382357_P_NODE_99103_length_243_cov_1.659341_g98364_i0 PRJNA382357 99103 243 1.659341 4.03219863 Shenzhen dicistro-like virus 2789378 Viruses Viruses 263 9.3e-66   NTclustered gi|1940198121|gb|MT757492.1| 2789378 g98364 i0 95.706 2.46502057613169 163 6 100 1 1 162 6368 6530 Shenzhen dicistro-like virus strain CHNdp-2 polyprotein gene, complete cds blastn 599 263 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
10607511 10607511 PRJNA382357_P_NODE_36469_length_377_cov_18.322785_g35730_i0 PRJNA382357 36469 377 18.322785 69.07689945 uncultured partitivirus 1075819 Viruses Viruses 292 1.94e-74   NTclustered gi|379055516|emb|HE579553.1| 1075819 g35730 i0 93.814 7.96021220159151 194 12 90 0 1 194 415 608 Uncultured partitivirus genomic RNA containing putative CP, contig 87Pv1_cloning_4 blastn 3001 292 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   uncultured partitivirus
19528936 19528936 PRJNA382357_P_NODE_154816_length_202_cov_1.524823_g154077_i0 PRJNA382357 154816 202 1.524823 3.08014246 Betacoronavirus hongkongense 3433758 Viruses Viruses 206 1.28e-48   NTclustered gi|2431686138|gb|ON136172.1| 290028 g154077 i0 100 102.475247524752 111 0 100 0 1 111 29594 29484 Human coronavirus HKU1 isolate HKU1A_4, partial genome blastn 20700 206 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus hongkongense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;