RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA382357 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6782093 6782093 PRJNA382357_P_NODE_77066_length_271_cov_3.714286_g76327_i0 PRJNA382357 77066 271 3.714286 10.06571506 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 75 5.3e-9   NTclustered gi|88792583|gb|DQ386164.1| 372086 g76327 i0 84.615 19.6420664206642 78 9 42 3 188 265 1825 1751 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 5323 75 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
10607708 10607708 PRJNA382357_P_NODE_48349_length_333_cov_3.966912_g47610_i0 PRJNA382357 48349 333 3.966912 13.20981696 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 193 1.77e-44   NTclustered gi|238617605|gb|FJ973380.1| 45107 g47610 i0 81.048 45.0810810810811 248 41 74 6 1 245 1562 1318 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15012 193 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
13158259 13158259 PRJNA382357_P_NODE_83271_length_262_cov_3.950249_g82532_i0 PRJNA382357 83271 262 3.950249 10.34965238 Mesofila limnetica 1979842 SAR_Eukaryotes SAR_Eukaryotes 122 1.8e-23   NTclustered gi|88792585|gb|DQ386166.1| 1979842 g82532 i0 91.954 33.6679389312977 87 7 33 0 11 97 1549 1463 Dimorpha-like sp. ATCC 50522 28S ribosomal RNA gene, partial sequence blastn 8821 122 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila limnetica
20805091 20805091 PRJNA382357_P_NODE_26037_length_439_cov_1.656000_g25299_i0 PRJNA382357 26037 439 1.656 7.26984 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 230 1.8299999999999994e-55   NTclustered gi|238617605|gb|FJ973380.1| 45107 g25299 i0 97.744 32.5421412300683 133 3 46 0 307 439 1695 1563 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 14286 230 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;