RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA382357 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1677196 1677196 PRJNA382357_P_NODE_11022_length_633_cov_1.477273_g10313_i0 PRJNA382357 11022 633 1.477273 9.35113809 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 745 0   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g10313 i0 88.088 637.928909952607 638 62 100 11 1 633 160856 161484 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 403809 745 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
18254349 18254349 PRJNA382357_P_NODE_13015_length_589_cov_5.723485_g12294_i0 PRJNA382357 13015 589 5.723485 33.71132665 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 363 2.37e-95   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g12294 i0 83.168 36.2563667232598 404 60 99 8 1 399 161797 162197 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 21355 363 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
24628626 24628626 PRJNA382357_P_NODE_10260_length_651_cov_5.188136_g9558_i0 PRJNA382357 10260 651 5.188136 33.77476536 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 355 4.41e-93   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g9558 i0 80.81 95.4070660522273 469 76 94 11 25 486 160503 160964 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 62110 355 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;