RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA382357 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1678549 1678549 PRJNA382357_P_NODE_38082_length_370_cov_7.501618_g37343_i0 PRJNA382357 38082 370 7.501618 27.7559866 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 309 1.89e-79   NTclustered gi|808354332|gb|CP011097.2| 1603555 g37343 i0 89.388 0.97027027027027 245 26 95 0 66 310 1204623 1204379 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 359 309 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
2954291 2954291 PRJNA382357_P_NODE_32663_length_397_cov_0.916667_g31924_i0 PRJNA382357 32663 397 0.916667 3.63916799 Nitrosopumilus sp. 2024843 Archaea Archaea 54.7 0.011   NTclustered gi|1885871577|gb|CP046181.1| 2024843 g31924 i0 96.875 0.0806045340050378 32 1 8 0 350 381 648138 648107 MAG: Nitrosopumilus sp. isolate MH-Pat-all_metabat2_16 chromosome blastn 32 54.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;