contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA382357" and tax_kingdom = "Fusobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1678139 | 1678139 | PRJNA382357_P_NODE_171422_length_168_cov_4.009346_g170683_i0 | PRJNA382357 | 171422 | 168 | 4.009346 | 6.73570128 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 198 | 1.7099999999999997e-46 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g170683 | i0 | 100 | 229.672619047619 | 107 | 0 | 99 | 0 | 62 | 168 | 54373 | 54267 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 38585 | 198 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 1679204 | 1679204 | PRJNA382357_P_NODE_77042_length_271_cov_4.500000_g76303_i0 | PRJNA382357 | 77042 | 271 | 4.5 | 12.195 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 398 | 2.7699999999999993e-106 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g76303 | i0 | 100 | 328.059040590406 | 215 | 0 | 100 | 0 | 57 | 271 | 52765 | 52551 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 88904 | 398 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 5506747 | 5506747 | PRJNA382357_P_NODE_150605_length_204_cov_0.909091_g149866_i0 | PRJNA382357 | 150605 | 204 | 0.909091 | 1.85454564 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 202 | 1.67e-47 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g149866 | i0 | 100 | 8.45588235294118 | 109 | 0 | 100 | 0 | 96 | 204 | 1624025 | 1624133 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 1725 | 202 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 6782006 | 6782006 | PRJNA382357_P_NODE_7186_length_756_cov_59.873381_g6524_i0 | PRJNA382357 | 7186 | 756 | 59.873381 | 452.64276036 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 1219 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g6524 | i0 | 100 | 442.822751322751 | 660 | 0 | 100 | 0 | 1 | 660 | 52863 | 53522 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 334774 | 1219 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 7452884 | 7452884 | PRJNA382357_P_NODE_169926_length_172_cov_4.072072_g169187_i0 | PRJNA382357 | 169926 | 172 | 4.072072 | 7.00396384 | Fusobacteriaceae | 203492 | Bacteria | Bacteria | 209 | 8.09e-50 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g169187 | i0 | 100 | 371.889534883721 | 113 | 0 | 66 | 0 | 1 | 113 | 156665 | 156777 | Fusobacterium varium strain SB069 chromosome | blastn | 63965 | 209 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 9330941 | 9330941 | PRJNA382357_P_NODE_137048_length_210_cov_0.872483_g136309_i0 | PRJNA382357 | 137048 | 210 | 0.872483 | 1.8322143 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 283 | 6e-72 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g136309 | i0 | 100 | 22.8095238095238 | 153 | 0 | 93 | 0 | 43 | 195 | 1341612 | 1341460 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 4790 | 283 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 9331148 | 9331148 | PRJNA382357_P_NODE_151728_length_203_cov_14.007042_g150989_i0 | PRJNA382357 | 151728 | 203 | 14.007042 | 28.43429526 | Pseudoleptotrichia goodfellowii | 157692 | Bacteria | Bacteria | 158 | 3.6399999999999997e-34 | NTclustered | gi|1708563796|dbj|AP019822.1| | 157692 | g150989 | i0 | 97.802 | 96.1871921182266 | 91 | 2 | 45 | 0 | 103 | 193 | 398452 | 398542 | Leptotrichia goodfellowii JCM16774 DNA, complete genome | blastn | 19526 | 158 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Pseudoleptotrichia | Pseudoleptotrichia goodfellowii | ||
| 13156629 | 13156629 | PRJNA382357_P_NODE_14051_length_571_cov_4.335294_g13330_i0 | PRJNA382357 | 14051 | 571 | 4.335294 | 24.75452874 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 484 | 4.689999999999999e-132 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g13330 | i0 | 100 | 94.3485113835377 | 262 | 0 | 96 | 0 | 5 | 266 | 51593 | 51854 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 53873 | 484 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 14431991 | 14431991 | PRJNA382357_P_NODE_16212_length_539_cov_2.443515_g15486_i0 | PRJNA382357 | 16212 | 539 | 2.443515 | 13.17054585 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 952 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g15486 | i0 | 98.521 | 712.502782931354 | 541 | 4 | 100 | 4 | 1 | 539 | 54109 | 53571 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 384039 | 952 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 15103168 | 15103168 | PRJNA382357_P_NODE_62952_length_296_cov_7.710638_g62213_i0 | PRJNA382357 | 62952 | 296 | 7.710638 | 22.82348848 | Fusobacteriaceae | 203492 | Bacteria | Bacteria | 259 | 1.51e-64 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g62213 | i0 | 100 | 468.155405405405 | 140 | 0 | 100 | 0 | 157 | 296 | 157906 | 158045 | Fusobacterium varium strain SB069 chromosome | blastn | 138574 | 259 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 16981482 | 16981482 | PRJNA382357_P_NODE_61994_length_298_cov_3.292479_g61255_i0 | PRJNA382357 | 61994 | 298 | 3.292479 | 9.81158742 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 540 | 4.85e-149 | NTclustered | gi|1708577445|dbj|AP019835.1| | 157687 | g61255 | i0 | 99.329 | 145.694630872483 | 298 | 2 | 100 | 0 | 1 | 298 | 2368717 | 2368420 | Leptotrichia wadei JMUB3934 DNA, complete genome | blastn | 43417 | 540 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 17652543 | 17652543 | PRJNA382357_P_NODE_171634_length_167_cov_7.905660_g170895_i0 | PRJNA382357 | 171634 | 167 | 7.90566 | 13.2024522 | Fusobacterium | 848 | Bacteria | Bacteria | 113 | 6.34e-21 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g170895 | i0 | 100 | 502.874251497006 | 61 | 0 | 100 | 0 | 1 | 61 | 107863 | 107803 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 83980 | 113 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 17652821 | 17652821 | PRJNA382357_P_NODE_49974_length_328_cov_3.651685_g49235_i0 | PRJNA382357 | 49974 | 328 | 3.651685 | 11.9775268 | Leptotrichia | 32067 | Bacteria | Bacteria | 595 | 1.1399999999999998e-165 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g49235 | i0 | 99.39 | 692.670731707317 | 328 | 2 | 100 | 0 | 1 | 328 | 71251 | 71578 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 227196 | 595 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 17653147 | 17653147 | PRJNA382357_P_NODE_90894_length_252_cov_28.821990_g90155_i0 | PRJNA382357 | 90894 | 252 | 28.82199 | 72.6314148 | Fusobacterium | 848 | Bacteria | Bacteria | 283 | 7.44e-72 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g90155 | i0 | 100 | 470.964285714286 | 153 | 0 | 99 | 0 | 100 | 252 | 1939 | 1787 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 118683 | 283 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 18926829 | 18926829 | PRJNA382357_P_NODE_6215_length_803_cov_2.250674_g5569_i0 | PRJNA382357 | 6215 | 803 | 2.250674 | 18.07291222 | Leptotrichia | 32067 | Bacteria | Bacteria | 1264 | 0 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g5569 | i0 | 95.037 | 395.39103362391 | 806 | 36 | 100 | 4 | 1 | 803 | 1029 | 225 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 317499 | 1269 | 0.996059889676911 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 19529633 | 19529633 | PRJNA382357_P_NODE_41656_length_356_cov_1.616949_g40917_i0 | PRJNA382357 | 41656 | 356 | 1.616949 | 5.75633844 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 555 | 2.1099999999999994e-153 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g40917 | i0 | 100 | 173.370786516854 | 300 | 0 | 100 | 0 | 1 | 300 | 2083766 | 2083467 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 61720 | 555 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 19529956 | 19529956 | PRJNA382357_P_NODE_61456_length_299_cov_4.525210_g60717_i0 | PRJNA382357 | 61456 | 299 | 4.52521 | 13.5303779 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 484 | 2.3099999999999998e-132 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g60717 | i0 | 98.893 | 393.28762541806 | 271 | 3 | 91 | 0 | 29 | 299 | 1994447 | 1994717 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 117593 | 484 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 25301497 | 25301497 | PRJNA382357_P_NODE_560_length_2081_cov_3.967822_g258_i0 | PRJNA382357 | 560 | 2081 | 3.967822 | 82.57037582 | Fusobacterium | 848 | Bacteria | Bacteria | 1997 | 0 | NTclustered | gi|2078816781|gb|CP071094.1| | 76857 | g258 | i0 | 99.908 | 467.592023065834 | 1084 | 1 | 98 | 0 | 71 | 1154 | 688638 | 687555 | Fusobacterium polymorphum strain THCT15E1 chromosome, complete genome | blastn | 973059 | 1997 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;