RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA380660" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380660 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1677017 1677017 PRJNA380660_P_NODE_6742_length_286_cov_2.284047_g6342_i0 PRJNA380660 6742 286 2.284047 6.53237442 uncultured Glomeromycotina 241622 Fungi Fungi 106 2e-18   NTclustered gi|2863800393|gb|PQ669850.1| 241622 g6342 i0 92 5.11888111888112 75 6 26 0 192 266 878 804 Uncultured Glomeromycotina isolate HbAMF84 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1464 106 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
8055493 8055493 PRJNA380660_P_NODE_12667_length_155_cov_1.960317_g12267_i0 PRJNA380660 12667 155 1.960317 3.03849135 Lobosporangium transversale 64571 Fungi Fungi 52.8 0.013   NTclustered gi|1227143852|ref|XM_022030377.1| 64571 g12267 i0 100 0.180645161290323 28 0 18 0 127 154 505 532 Lobosporangium transversale hypothetical protein (BCR41DRAFT_424119), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;