RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA380416" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380416 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4229201 4229201 PRJNA380416_P_NODE_7784_length_205_cov_1.307692_g7637_i0 PRJNA380416 7784 205 1.307692 2.6807686 Rhizomucor pusillus 4840 Fungi Fungi 132 2.24e-26   NTclustered gi|2837716112|ref|XM_069385268.1| 4840 g7637 i0 78.641 4.90243902439024 206 39 100 4 1 205 400 199 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_6374), partial mRNA blastn 1005 132 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
23354077 23354077 PRJNA380416_P_NODE_4799_length_267_cov_1.871560_g4652_i0 PRJNA380416 4799 267 1.87156 4.9970652 Lobosporangium transversale 64571 Fungi Fungi 54.7 0.007   NTclustered gi|1227131076|ref|XM_022028459.1| 64571 g4652 i0 100 0.108614232209738 29 0 11 0 196 224 2512 2540 Lobosporangium transversale hypothetical protein (BCR41DRAFT_392503), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;