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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA380416" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA380416 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
402056 402056 PRJNA380416_P_NODE_5561_length_246_cov_1.030457_g5414_i0 PRJNA380416 5561 246 1.030457 2.53492422 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 455 1.4500000000000002e-123   NTclustered gi|300521444|gb|GQ377690.1| 151077 g5414 i0 100 1 246 0 100 0 1 246 460 215 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 246 455 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1676784 1676784 PRJNA380416_P_NODE_8182_length_200_cov_1.006623_g8035_i0 PRJNA380416 8182 200 1.006623 2.013246 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 331 1.99e-86   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g8035 i0 96.5 30.565 200 7 100 0 1 200 367 566 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 6113 331 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6779761 6779761 PRJNA380416_P_NODE_9286_length_187_cov_1.471014_g9139_i0 PRJNA380416 9286 187 1.471014 2.75079618 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 346 6.56e-91   NTclustered gi|301014695|gb|GQ377692.1| 151077 g9139 i0 100 8.49197860962567 187 0 100 0 1 187 246 60 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 1588 346 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8726835 8726835 PRJNA380416_P_NODE_8727_length_193_cov_1.263889_g8580_i0 PRJNA380416 8727 193 1.263889 2.43930577 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 351 1.46e-92   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g8580 i0 99.482 100.233160621762 193 1 100 0 1 193 1341 1149 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 19345 351 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11880736 11880736 PRJNA380416_P_NODE_13270_length_162_cov_1.761062_g13123_i0 PRJNA380416 13270 162 1.761062 2.85292044 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 300 4.36e-77   NTclustered gi|110644972|gb|DQ665918.1| 151077 g13123 i0 100 76.5061728395062 162 0 100 0 1 162 526 365 Chilodonella uncinata clone 1 beta-tubulin gene, partial cds blastn 12394 300 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14430788 14430788 PRJNA380416_P_NODE_9492_length_185_cov_1.250000_g9345_i0 PRJNA380416 9492 185 1.25 2.3125 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 326 8.430000000000001e-85   NTclustered gi|347439279|gb|JN111988.1| 151077 g9345 i0 98.378 87.1405405405405 185 3 100 0 1 185 289 473 Chilodonella uncinata strain USA_WH clone P1 beta tubulin (btub) gene, partial cds; macronuclear blastn 16121 326 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15704709 15704709 PRJNA380416_P_NODE_11173_length_167_cov_1.533898_g11026_i0 PRJNA380416 11173 167 1.533898 2.56160966 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|301014695|gb|GQ377692.1| 151077 g11026 i0 100 1 167 0 100 0 1 167 430 264 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 167 309 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24628304 24628304 PRJNA380416_P_NODE_10080_length_179_cov_1.161538_g9933_i0 PRJNA380416 10080 179 1.161538 2.07915302 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 259 8.32e-65   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g9933 i0 92.737 54.4301675977654 179 13 100 0 1 179 2037 1859 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 9743 259 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;