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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA380416" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA380416 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
402047 402047 PRJNA380416_P_NODE_13121_length_163_cov_0.894737_g12974_i0 PRJNA380416 13121 163 0.894737 1.45842131 Bodo saltans 75058 Euglenozoa other_Eukaryota 185 1.28e-42   NTclustered gi|301014698|gb|GQ377700.1| 75058 g12974 i0 87.117 17.3067484662577 163 21 100 0 1 163 61 223 Bodo saltans ribosomal protein S23a (rps23a) mRNA, complete cds blastn 2821 185 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
1676776 1676776 PRJNA380416_P_NODE_5302_length_252_cov_3.103448_g5155_i0 PRJNA380416 5302 252 3.103448 7.82068896 Neobodo designis 312471 Euglenozoa other_Eukaryota 466 6.89e-127   NTclustered gi|59891949|gb|AY753609.1| 312471 g5155 i0 100 99.8809523809524 252 0 100 0 1 252 2094 1843 Neobodo designis isolate JC17 18S ribosomal RNA gene, partial sequence blastn 25170 466 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
2952657 2952657 PRJNA380416_P_NODE_7783_length_205_cov_1.358974_g7636_i0 PRJNA380416 7783 205 1.358974 2.7858967 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 368 1.57e-97   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g7636 i0 99.024 3.19024390243902 205 2 100 0 1 205 3549 3345 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 654 368 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
4229209 4229209 PRJNA380416_P_NODE_9704_length_183_cov_1.238806_g9557_i0 PRJNA380416 9704 183 1.238806 2.26701498 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 327 2.31e-85   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g9557 i0 98.907 23.3169398907104 183 2 100 0 1 183 297 115 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 4267 327 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
6779748 6779748 PRJNA380416_P_NODE_13066_length_163_cov_0.894737_g12919_i0 PRJNA380416 13066 163 0.894737 1.45842131 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 165 1.67e-36   NTclustered gi|686631738|ref|XM_009310040.1| 71804 g12919 i0 85.093 12.0061349693252 161 24 99 0 1 161 1301 1141 Trypanosoma grayi elongation factor 2 partial mRNA blastn 1957 165 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
7452067 7452067 PRJNA380416_P_NODE_2746_length_364_cov_1.796825_g2599_i0 PRJNA380416 2746 364 1.796825 6.540443 Trypanosoma 5690 Euglenozoa other_Eukaryota 532 1.01e-146   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g2599 i0 94.752 150.315934065934 343 16 94 2 1 342 4359 4700 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 54715 532 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
8055265 8055265 PRJNA380416_P_NODE_5447_length_249_cov_1.275000_g5300_i0 PRJNA380416 5447 249 1.275 3.17475 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.023   NTclustered gi|1031970221|gb|CP015655.1| 85057 g5300 i0 100 0.112449799196787 28 0 11 0 24 51 50537 50510 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI5, partial sequence blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
8055266 8055266 PRJNA380416_P_NODE_5907_length_237_cov_2.377660_g5760_i0 PRJNA380416 5907 237 2.37766 5.6350542 Neobodo designis 312471 Euglenozoa other_Eukaryota 387 5.13e-103   NTclustered gi|197723537|gb|EF681922.2| 312471 g5760 i0 96.203 159.949367088608 237 8 100 1 1 237 999 1234 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 37908 387 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
14430783 14430783 PRJNA380416_P_NODE_4912_length_263_cov_1.429907_g4765_i0 PRJNA380416 4912 263 1.429907 3.76065541 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 438 1.5799999999999996e-118   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g4765 i0 96.935 139.342205323194 261 8 99 0 1 261 5231 4971 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 36647 438 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
16376613 16376613 PRJNA380416_P_NODE_7813_length_204_cov_5.058065_g7666_i0 PRJNA380416 7813 204 5.058065 10.3184526 Leishmania 5658 Euglenozoa other_Eukaryota 339 1.22e-88   NTclustered gi|440222381|gb|JX030049.1| 5659 g7666 i0 96.585 137.269607843137 205 6 100 1 1 204 617 821 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 28003 339 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
16979371 16979371 PRJNA380416_P_NODE_3434_length_325_cov_1.626812_g3287_i0 PRJNA380416 3434 325 1.626812 5.287139 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 254 7.799999999999999e-63   NTclustered gi|1002433688|ref|XR_001548756.1| 157538 g3287 i0 85.433 83.6646153846154 254 26 76 10 78 325 264 16 Leptomonas pyrrhocoris 28S ribosomal RNA (LSU-beta) rRNA blastn 27191 254 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
24628322 24628322 PRJNA380416_P_NODE_6880_length_219_cov_1.111765_g6733_i0 PRJNA380416 6880 219 1.111765 2.43476535 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 361 2.83e-95   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g6733 i0 96.347 6.64383561643836 219 8 100 0 1 219 2216 1998 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1455 361 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;