RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA380129" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380129 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6779731 6779731 PRJNA380129_P_NODE_1266_length_527_cov_1.522088_g950_i0 PRJNA380129 1266 527 1.522088 8.02140376 Malassezia restricta 76775 Fungi Fungi 475 2.5899999999999994e-129   NTclustered gi|1321659621|gb|KY911094.1| 76775 g950 i0 99.617 44.6508538899431 261 0 72 1 268 527 2195 1935 Malassezia restricta mitochondrion, complete genome blastn 23531 475 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
22078530 22078530 PRJNA380129_P_NODE_1258_length_531_cov_2.952191_g942_i0 PRJNA380129 1258 531 2.952191 15.67613421 Vuilleminia pseudocystidiata 47061 Fungi Fungi 448 5.689999999999999e-121   NTclustered gi|1473261214|gb|MH874158.1| 47061 g942 i0 100 62.8323917137476 242 0 61 0 41 282 23 264 Vuilleminia pseudocystidiata culture CBS:347.95 strain CBS 347.95 large subunit ribosomal RNA gene, partial sequence blastn 33364 448 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Corticiales Vuilleminiaceae Vuilleminia Vuilleminia pseudocystidiata
23354052 23354052 PRJNA380129_P_NODE_3199_length_283_cov_2.751969_g2875_i0 PRJNA380129 3199 283 2.751969 7.78807227 Paxillus rubicundulus 463315 Fungi Fungi 141 5.42e-29   NTclustered gi|1778128217|ref|NC_045204.1| 463315 g2875 i0 100 25.1413427561837 76 0 27 0 116 191 20185 20110 Paxillus rubicundulus mitochondrion, complete genome blastn 7115 141 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Paxillaceae Paxillus Paxillus rubicundulus
24628295 24628295 PRJNA380129_P_NODE_1420_length_479_cov_2.273333_g1101_i0 PRJNA380129 1420 479 2.273333 10.88926507 Wolfiporia cocos 81056 Fungi Fungi 462 1.82e-125   NTclustered gi|126508724|gb|EF397600.1| 81056 g1101 i0 100 72.3465553235908 250 0 68 0 230 479 1559 1808 Poria cocos strain KANP No. 7233 28S ribosomal RNA gene, partial sequence blastn 34654 462 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Phaeolaceae Wolfiporia Wolfiporia cocos

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;