RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA380129" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA380129 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3624853 3624853 PRJNA380129_P_NODE_1103_length_604_cov_1.363478_g792_i0 PRJNA380129 1103 604 1.363478 8.23540712 root 1 Root_unresolved Root_unresolved 291 1.1599999999999998e-73   NTclustered gi|85002188|gb|DQ341383.1| 5061 g792 i0 100 68.2698675496689 157 0 68 0 448 604 1236 1392 Aspergillus niger strain 094811 18S ribosomal RNA gene, partial sequence blastn 41235 291 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
6177045 6177045 PRJNA380129_P_NODE_2985_length_353_cov_5.391975_g2661_i0 PRJNA380129 2985 353 5.391975 19.03367175 Aspergillus 5052 Fungi Fungi 627 4.359999999999999e-175   NTclustered gi|158535183|gb|EF652038.1| 469263 g2661 i0 99.708 96.8781869688385 342 1 97 0 1 342 559 900 Aspergillus sp. NRRL 145 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 34198 632 0.992088607594937 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sp. NRRL 145
8055239 8055239 PRJNA380129_P_NODE_1487_length_465_cov_1.584862_g1166_i0 PRJNA380129 1487 465 1.584862 7.3696083 Aspergillus verrucosus 3033834 Fungi Fungi 364 5.109999999999999e-96   NTclustered gi|2666209008|dbj|LC797029.1| 3033834 g1166 i0 99.015 63.0903225806452 203 2 63 0 1 203 32099 31897 Aspergillus verrucosus NBRC 115547 mitochondrial DNA, complete genome blastn 29337 364 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus verrucosus
15101929 15101929 PRJNA380129_P_NODE_832_length_694_cov_1.798496_g528_i0 PRJNA380129 832 694 1.798496 12.48156224 root 1 Root_unresolved Root_unresolved 63.9 3.2e-5   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g528 i0 93.333 0.345821325648415 45 0 6 1 633 677 2257 2216 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 240 63.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;